| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0019 |
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| Symbol | |
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| ID | 4009492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 3337230 |
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| End bp | 3338096 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637952635 |
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| Product | putative squalene/phytoene synthase |
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| Protein accession | YP_555255 |
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| Protein GI | 91780047 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCG ATCAGTACGA AAATTTTCCG GTCGCGAGCG TGTTGCTGCC CAAGGCGCTG
CGCGCGCCTG TCGGCGTAAT CTATCAGGTC GTCCGCACGG CGGGCGACAT TGCCGACGAA
GGCGACTGGA GCGCGGCCGA ACGGCACGCC CGTCTCGCCG ACTTCCGCGC CGGTCTCGAC
GCGGTGGCGG AGCGGCGTGC GGCGCCGGTG CACGCGCTTC TGTTCGGCAA GCTCGCCGGT
GTCGTCGCGC AGTATAAACT ACCGCTCGCG CCGTTCTACG ATCTGCTGCA TGCGTGCGCT
CAGGATATCG ACACCAATCG CTACGCCGAC CGGGCCGCGC TACTGGACTA TTGCCGCCAC
TCGGCGAACC CGCTCGGGCA TCTGATGCTG CACCTGATCG GCGCGGCCAC GCCGGAAAAT
CTCGCCGACG CCGACGCGAT CTGCACGGCG TCGCAGCTGA TCAGCTTCTG GCTCGACGTC
TCCGCCGACT GGGAAAAAGA CCGCGTATAT CTGCCGCTCG CCGACCTGCG GCGCTTCAAC
GTCGGCGAGG CGCATATCGC CAACGGTGTC GCCGATCAGG ACTGGCGCGC GCTCATGGCA
CATGAAGTGT CCTTCGTCCG GCAGATGCTG GTGCGCGGCG CGCCGCTCGC CTTGCGCATT
TCCGGCCGGC TGGGAATCGA GTTATGCGGC GCCATTCACG GCGGCCTGCG CTTGCTCGAA
CGGATCGAGA AGGCAGGCTA CGACGTGTTT CGCGAGCGAC CGGAACTCAA CACGTTTGAC
TGGTGCGTCG TCGCGGCCCG CACCGCAGTG ATGTGGCTGT CGCGGCGCGT CGGTGTGGCA
GCGCGTTCAA TCGAGGGTAA TGCTTAA
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| Protein sequence | MDVDQYENFP VASVLLPKAL RAPVGVIYQV VRTAGDIADE GDWSAAERHA RLADFRAGLD
AVAERRAAPV HALLFGKLAG VVAQYKLPLA PFYDLLHACA QDIDTNRYAD RAALLDYCRH
SANPLGHLML HLIGAATPEN LADADAICTA SQLISFWLDV SADWEKDRVY LPLADLRRFN
VGEAHIANGV ADQDWRALMA HEVSFVRQML VRGAPLALRI SGRLGIELCG AIHGGLRLLE
RIEKAGYDVF RERPELNTFD WCVVAARTAV MWLSRRVGVA ARSIEGNA
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