| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3857 |
|---|
| Symbol | |
|---|
| ID | 4002490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 680295 |
|---|
| End bp | 682034 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637945794 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_557193 |
|---|
| Protein GI | 91781987 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCATCG ATACGCGTAC TGTTGAACAA AACACGGTCA TTGAAACGAC GGTCTGCATC
ATCGGCGCAG GCGTCGCGGG AATTACGCTT GCGCTCGAAA TGTCGCGGGC CGGTATCGAT
GCCTGCGTGC TCGAAAGCGG TGGCTTTGGA CCCGACGACG CGACCCGCGA TCTGTATCGC
GGCGAGAACA TCGGGCTTCC CTACACGTTT GCGGACGGCT CGCGCAGCCG GTATTTCGGC
GGCAGCAGCA ACTGCTGGGG CGGCTGGTGC CGCCCGCTCG ATCCCTGGGA CTTCGAAAAG
CGCGACTGGA TCGCGCACAG CGGCTGGCCG TTCGGGCTCG ATGAACTGGC GCCCTACTAT
GCGCGCACGC ACGAACTGCT GAAGCTCGGC CCGCAGAATT TCGACCCCGC ATACTGGGAG
CGCGAGATCG GTCGCCAGGA CGTGCGCCGC CTGCCGCTCG CCACCGGCGA TATGCGCGAT
ACCGTTGCGC AGTTCAGCCC GCCGGTGCGC TTCGGCAAGG CGTATCGCGA GGAACTCTCG
CGCTCCACGC GGGTGCGTGT GTTTCTCCAT GCGAACGTGC TCAATATCGA CGCCGACGCA
CAGGGCACGG CAATTTCCAG GGTGAAGATC GGCACGATCA GCGGCCGCCG GCTCACGATG
ACCGCGAGGA TTTTCGTGCT GGCCACGGGC GGCATCGAAA ACGCGCGCCT GCTGCTCGCG
TCGAACAACG TGCAGGCCGC CGGCCTCGGC AATGCCAACG ACCTGGTCGG CCGCTATTTC
ATGGATCATC CGCGCATGAT GTCGGGCAAG GTGCGCTTCC GTCCGGGCAT TGCGCGCAAC
AAGCTGTACG ACATCAAGTA TCACTACCAG AATGCGGCGG TGTCGGCGCA CGGCACGAAG
ATCTCGTCAC AGTTCGCGCC GAAACAGGAA TGGATGGAGC GCGAGAAGCT GCTCAATTCA
CGCGTCTGGC TCTATTCGAA ATGGTATGGC GAAGGCAGCG CGGGTTCCGA GGCGTTGATC
CGCCTCAAGG AAGCGCTGAT GGGCAAGGAC CAGCCGGGTC GCAGCCTGAA GCGCGACATC
GAGACCATGA TTGCGCACCC GCTGCACACC GTCGGTTTTG GTTTGACCCG GCTGTTGCAA
TGGCCCGCGC TGATTACCGA CGTGACGCTG CAGGCTATCG TCGAAGCGGT GCCCAATCCG
GATAGCCGCG TCACATTGTC GGCGGACAGG CGCGACCACT TCGGCATGCC GCGCGTGCGG
GTGGAGTGGC GCCTCGGCGA ACAGGTGCAG CGCACTTTCG ACAAGACGTT CCAGTTGCTC
GCGCAGGAAT TGCAGATGGC GAACGTCGCG GACGTCACGC TCGACGAGTC GCTCGAAGGC
CGGACGTGGC CGGCGAAACT GGAAGGCACG TGGCACCACA TGGGCACCAC GCGCATGCAC
GACTCGCCGC GCGAGGGCGT GGTCGATCGC GATTGCAAGG TGCACGGGAT CAGCAACCTG
TACATTGGCG GCAGTTCGGT GTTTCCGACT GTCGGCGCCA ACTTCCCGAC CATCACGATT
GCCGCGCTGG CGCTGCGCCT CGCCGGTCAT CTGAAACGGC AGCTCGATTT GCCGGAACTC
GTCGGCATTA CACGGGGCGA CGCCGCGAAC AGCGCCGCCA TGTCGCTTCA GGCGCCGCCT
CAGGTCGACA CGTTGCCGAT CGCCGCCTCG ACCCTGACGC CGTTGATGAA GGAACAGTGA
|
|---|
| Protein sequence | MFIDTRTVEQ NTVIETTVCI IGAGVAGITL ALEMSRAGID ACVLESGGFG PDDATRDLYR
GENIGLPYTF ADGSRSRYFG GSSNCWGGWC RPLDPWDFEK RDWIAHSGWP FGLDELAPYY
ARTHELLKLG PQNFDPAYWE REIGRQDVRR LPLATGDMRD TVAQFSPPVR FGKAYREELS
RSTRVRVFLH ANVLNIDADA QGTAISRVKI GTISGRRLTM TARIFVLATG GIENARLLLA
SNNVQAAGLG NANDLVGRYF MDHPRMMSGK VRFRPGIARN KLYDIKYHYQ NAAVSAHGTK
ISSQFAPKQE WMEREKLLNS RVWLYSKWYG EGSAGSEALI RLKEALMGKD QPGRSLKRDI
ETMIAHPLHT VGFGLTRLLQ WPALITDVTL QAIVEAVPNP DSRVTLSADR RDHFGMPRVR
VEWRLGEQVQ RTFDKTFQLL AQELQMANVA DVTLDESLEG RTWPAKLEGT WHHMGTTRMH
DSPREGVVDR DCKVHGISNL YIGGSSVFPT VGANFPTITI AALALRLAGH LKRQLDLPEL
VGITRGDAAN SAAMSLQAPP QVDTLPIAAS TLTPLMKEQ
|
|---|
| |