Gene Bxe_A3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3550 
Symbol 
ID4004907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand+ 
Start bp1011238 
End bp1011867 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID637946091 
ProductTetR family transcriptional regulator 
Protein accessionYP_557490 
Protein GI91782284 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.123962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.200142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA AAGTGCCAGA ACGACGTCGC ACCCAGGCGG AAAGACGCGA GGAAACGCGT 
TCGCGGATAT TGGACGCAGC CGTCAGCGAG TTGATGAACA AGGGCTACGC CGGGTTCCGG 
GTCGACCAGG TTGCAGCCAC TGCCAGGGTA TCGCGCGGCG CCCAGACCCA TCATTTCCCG 
ACCAAGGAAT CGCTCGTTCT GGCGGCGCTT CAGCGGCTTT ACCAGGCGTC GACCGAGGCC 
AGCATGACGC TCATCGAGGG CCTGGAGTCG GGCGACGATG TGCTGGATGC GCTGATGCGG 
GACTCGGCCA GTTTCTACCT GGGACCGAAT TTCATCATTG CGGTGTCGAT GCTCAATCTT 
GGCGATCACG AACCCGGGCT GAGGCAGAAG GTTCGGGCGA TCTCGCGCAA GCACCGGTTG 
CCGGTCGAGA AGGCCTGGCT GCAGGCGCTG TTGGACTCTG GCCTGGCCGA AGAGCCGGCA 
AAAACGGTGC TGAACATCAC CCAGAGCATC TACCGCGGGA TGGTGATGCG CAAGTTCTTG 
CGCAACGATC CCGAGTACAC ACGCTTTACC ACGGAGCAGT GGTCGAAGAT TGCCCGTGCA 
TACATGAACC TGAACGCTCC GTCACGGTAG
 
Protein sequence
MIKKVPERRR TQAERREETR SRILDAAVSE LMNKGYAGFR VDQVAATARV SRGAQTHHFP 
TKESLVLAAL QRLYQASTEA SMTLIEGLES GDDVLDALMR DSASFYLGPN FIIAVSMLNL 
GDHEPGLRQK VRAISRKHRL PVEKAWLQAL LDSGLAEEPA KTVLNITQSI YRGMVMRKFL 
RNDPEYTRFT TEQWSKIARA YMNLNAPSR