| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3524 |
|---|
| Symbol | |
|---|
| ID | 4005278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1041354 |
|---|
| End bp | 1042025 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637946116 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_557515 |
|---|
| Protein GI | 91782309 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0849134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTGA TGGCAGTTTC ACGCGTCAAA GGGCCTGGCA CTACCGGCGG TGGGCGGCGT
ACTCAGGCAG AGCGAACAGA GGAGACGCGA GGCCGATTAC TCGACGCCTC GGTGCAGGTG
CTCGCCAAAA AGGGGTACGT GGGTTTTCGC ACTGCAGATG TCGCAGAGTT GGCCCAAGTC
TCGCGTGGAG CGCTAACACA TCACTTTCCT TCAAAGGATA AACTGATCAT TGCGACTCTC
GAGTACGCGT TTAGCGGAAC AGCGGAACGA GGTGCCATCC GTGCACATCG CCCGCGCTCC
GTGGATGAAA CGATCGCCGC GCTCATCAAG GACAGCCAGG ATTTCTTCTT CAGCGATCTG
TTCCTCATCG GGCTGGAATT TGCCGCGCTG AACCTGCGGG AGCCGGATGG TCCGATTCAA
ATTCACTCGA TTTCACGCAG CAGCCGCTTG CCGGTCGAAT CCGTTTGGGT GGAGGCGCTG
ATAGACTCGG GCATACCCAA GGCGATTGCG GAAGACGTGT TGTGGCTGAC GAACAGTATC
ATTCGCGGCC TAGCAGTGCG CCGTCTCTGG CAGCACGATC GTGCACGATT CAATCGTACG
CTTCGTGCGT GGCAGTCGAT CATCAAGTCT TACATCGAGC AATACAACGC CACTTCTGCA
AACCGGAAGT AA
|
|---|
| Protein sequence | MFLMAVSRVK GPGTTGGGRR TQAERTEETR GRLLDASVQV LAKKGYVGFR TADVAELAQV
SRGALTHHFP SKDKLIIATL EYAFSGTAER GAIRAHRPRS VDETIAALIK DSQDFFFSDL
FLIGLEFAAL NLREPDGPIQ IHSISRSSRL PVESVWVEAL IDSGIPKAIA EDVLWLTNSI
IRGLAVRRLW QHDRARFNRT LRAWQSIIKS YIEQYNATSA NRK
|
|---|
| |