| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3121 |
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| Symbol | |
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| ID | 4002772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1480908 |
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| End bp | 1481705 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637946519 |
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| Product | putative type III secretion system innermembrane protein, HcrT/YscT-like |
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| Protein accession | YP_557910 |
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| Protein GI | 91782704 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000139463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00260943 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGCGAGC CGCGAACTCG CGCGCTTTCT CTCGCACGTA TTCACCTATA TTGCAGCGGG
GCGTCTGCAT TGAGCATGGA AACCATCCGC TATATCGAAG GCTTTGCGTT CTGCACGATC
CGGCCGGCCG TGGCGCTTAG CCTGGTTCCA TTCAACCAGG GCGGCTCGGT GGGGATCGTG
TTGCGGCTGC CGCTCATGAT CGCGATCGCC ATGCTGCCGC AGCAGGTGGG CTGGCCGCCG
CACCTGTGGG CGGGGATGTT CTTCGAAATG GCGACCGGCG CTGTACTGGG GTTGCTGCTC
GGCACGATCT TTCACGCGGC GGGAGCCGCC GGTGCCGTGC TCGACCAGCA GGGCGGCTAC
ACGAGCGCCG CGATCTACGA CCCGAACTTC CAGCAGGAGG CGGCGCTGTT CGAAAGCCTG
TTTCTGCAAT TCGCCGCGTT GACGTTGTTC ACGGGGCCGG GTTTGCCGCT GCTGTACGGT
TTCTTTACGG ATGCGTGGGT GCTGTGGCCT CCCGGGCGCT GGCGCGGCGA TCTGGTCGAC
GTGTTCGGGC AGCTTGCGCA ACGCAATCTC GCGGACTCCC TGACCGAGGG TCTGCGTCTC
GCGAGTCCGT TGCTCGGCCT CGTGCTGCTG GTGGACATCG CATTCGGCCT GATGTCGCGG
CATGCGAAGC GCCTCAATCC GTTTGCGACC GCGCGCACCG TGAAAGCCGC GGTGCTGACG
TTCGCCGCCG TGCTCAGCGT GCCTGCGCTG TTCGCGCAGT TGCGCCTCGC ATTCGATCAC
GTGATCCATT TGCGATGA
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| Protein sequence | MGEPRTRALS LARIHLYCSG ASALSMETIR YIEGFAFCTI RPAVALSLVP FNQGGSVGIV
LRLPLMIAIA MLPQQVGWPP HLWAGMFFEM ATGAVLGLLL GTIFHAAGAA GAVLDQQGGY
TSAAIYDPNF QQEAALFESL FLQFAALTLF TGPGLPLLYG FFTDAWVLWP PGRWRGDLVD
VFGQLAQRNL ADSLTEGLRL ASPLLGLVLL VDIAFGLMSR HAKRLNPFAT ARTVKAAVLT
FAAVLSVPAL FAQLRLAFDH VIHLR
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