| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2980 |
|---|
| Symbol | |
|---|
| ID | 4004696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1625613 |
|---|
| End bp | 1626548 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637946661 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_558051 |
|---|
| Protein GI | 91782845 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0695506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.804372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTT CAAGAACCCT TATGAGCCGA GATCTCGACA GCAGCTTGCT GCGCACGTTC
GTCACCGTGG CGGAGACGGG GGCGATGGGT GTCGCGGCAA CGCGGCTCGC GCGCACTCAG
GCCGCGGTGA GCATGCAATT GCGCCGGCTC GAAGACGAAC TCGGCCAGCG TTTGCTCGAC
CGCTCGCCGC GCGGTGTGCA ACTCACCGAA GCCGGGCATC TGCTGCTGCC CTACGCGCAC
GCGATTCTCG GCGCGGGTGC CGACGCGCGC CGCGCGCTGA GCGCCGGGCA GGTGTCCGGC
ACCGTGCGGC TCGGCATGCT GGAGGATATT GCGGTCGGTC GCTTGCCGCG CGCGCTGCGG
CGCTTTTCGA TTGCTTATCC GCAAGTGGCG CTGGAAATCG TGGTCGACAG CAGTGTCGCG
TTGTCGAACC GGCTCGCGGA CAGCAGCCTC GATGTCGTGG TCGGCGATCC CGCGCTGGTC
GACGCGGCGC CGCTGCTGAC CTGGCGGCAG CCGCTCTTCT GGGTCGGCGC TCGCGGCTTT
GGCCGGGAAG TGGAGGCGCC TTTGCCGGTG GTGGCATTCG GCGGTGCGTG TCTGTGGCAG
CAGCAGGTTC TGGCGGCGTT GCGGCGCGCG GGAATTGCGT GGCGCATCGT GTGCACCAGC
ACCAGTCTGC CGGCCGTGCA ATCCGCCGTT GAAGCCGGGC TCGGCGTGTC GGTGCTGCTC
GACGGCAACA TCCGTTCGGA ATCGATGCGC GTGCTGGGCC AGGCCGATGG TTTGCCCGAC
GCGCCCACCG CGGACTTCGG GCTTTTCACG CGCGAAGTGC CGGGCGCACA GGCAGCGGCC
GTGCAAACCC TGCAAACGTT CCTCTGCGAG GAATTGCATC TCGGCCTGCG CGAAGGCGAG
CCGTCGCTCA TGCCGGTTTC GTCCGCATCG GGATGA
|
|---|
| Protein sequence | MPTSRTLMSR DLDSSLLRTF VTVAETGAMG VAATRLARTQ AAVSMQLRRL EDELGQRLLD
RSPRGVQLTE AGHLLLPYAH AILGAGADAR RALSAGQVSG TVRLGMLEDI AVGRLPRALR
RFSIAYPQVA LEIVVDSSVA LSNRLADSSL DVVVGDPALV DAAPLLTWRQ PLFWVGARGF
GREVEAPLPV VAFGGACLWQ QQVLAALRRA GIAWRIVCTS TSLPAVQSAV EAGLGVSVLL
DGNIRSESMR VLGQADGLPD APTADFGLFT REVPGAQAAA VQTLQTFLCE ELHLGLREGE
PSLMPVSSAS G
|
|---|
| |