| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2968 |
|---|
| Symbol | |
|---|
| ID | 4003653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1641815 |
|---|
| End bp | 1643002 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637946673 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_558063 |
|---|
| Protein GI | 91782857 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2342] Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCAGT ATGACTTTGG CCCGCTTCAG CGGGCCGCCC GCGCGCGCCT TGCGTTCAAT
GTCCATTGTG CCGGACGGCT CGCGCATCGA TGGATCGGCG CGGCTGTCGT CGTCGCCGCT
ACCGGCTTGA TGGCCGCTTG CGGAGGCGGG TCGGGCGGCA GCGGGGCTAA TTCGGCTAAC
GCTTCGAGCT CTTCCAACTC GAACAATCCG GCGAGTCCCG CGACGAACGC AAACAGCAAC
ACCAGCACGA ACACCAACAC GAACACGAAC AGCAACACCA GCACGAACAC CAACACCCAG
CCGACGAGCC CCGCGCCGGC GATCCCCGCG ACTCGCGCGT TGCCGGCCTC GCCGGTGTGG
GCGGCCTATT ACGGCCAGGG CAGCGCACTC GACATCGCCC AGGCCGCGGC CGCGTTCAAA
CTGATCGTGA TCGACGCGGA TCCCGGCAAC GGCTCGCCCG CCTTCTCCGC GTCGCAGATC
GCCGCGTTGA AGGCGAATGG CGCGAAGGTG CTCAGCTACC TGAATTTCGG CGCCTGCGAG
AAGTCGCGCA CATACTGGAA CACCGTCCCG TCGGGTTTCG TGTCGTGCGG CGCGAACACG
TCGGCGCAAA TCGGCAAATA TCAGGGCTTT CCGGAATACT GGATGAATCC CGCCAACGCC
GACTATCAGA ATCTGATCGT CAACTACGTG GCGGCGCGGC TCGCGGCGAC CGGTGTCGAC
GGCTTCATGC TGGATAACTT CGAGATCGTC GGACACGGCG CCGGTTCGTC CACCGCTCCG
TGCGACGCGG CCTGTGCGCA AGGCGGCCTC GATCTCGTCA GGCAGCTGCG CGACCGTTTT
CCGGATCTCG TGCTGGTGCC CAATGCCGCG CCGGTTCAGG CTATCGGCGG GACCACGGGA
GGCGTATCGT TTCCGTGGCT GATCGACGGC GTGATCGCCG AGCAGGTCTT CCTGCCGTCG
ACGAGCACGT CGATCGTGCA GCAGTTGAAG TCCTGGCGGA GCGCGGAGCA GGACCTCGGG
CGCAACGGCT TCTTCGCGGG GTCGCTCGAC TACGTGTCGT CGTGCACGGC GAGCTCGACC
GCGCAAACCG CGTGGACGGC CGCGCAACAG GCGGGGTTCA GTCCGTCGAT CTCGACTGAG
TCGCTCGACA GTATCTGCTG GTGGTCGTTC CTGCCGCGGG GCAGTTAG
|
|---|
| Protein sequence | MHQYDFGPLQ RAARARLAFN VHCAGRLAHR WIGAAVVVAA TGLMAACGGG SGGSGANSAN
ASSSSNSNNP ASPATNANSN TSTNTNTNTN SNTSTNTNTQ PTSPAPAIPA TRALPASPVW
AAYYGQGSAL DIAQAAAAFK LIVIDADPGN GSPAFSASQI AALKANGAKV LSYLNFGACE
KSRTYWNTVP SGFVSCGANT SAQIGKYQGF PEYWMNPANA DYQNLIVNYV AARLAATGVD
GFMLDNFEIV GHGAGSSTAP CDAACAQGGL DLVRQLRDRF PDLVLVPNAA PVQAIGGTTG
GVSFPWLIDG VIAEQVFLPS TSTSIVQQLK SWRSAEQDLG RNGFFAGSLD YVSSCTASST
AQTAWTAAQQ AGFSPSISTE SLDSICWWSF LPRGS
|
|---|
| |