| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2865 |
|---|
| Symbol | |
|---|
| ID | 4003564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1761405 |
|---|
| End bp | 1761986 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637946770 |
|---|
| Product | peptidase C56, PfpI |
|---|
| Protein accession | YP_558160 |
|---|
| Protein GI | 91782954 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAA AGAAAATTCT GTTTCTGACC GGCGACTTCG CCGAGGATTA CGAAACGATG
GTGCCGTTTC AGGCGCTGCA GGCAGTCGGC CACGTGGTCG ACGCGGTCTG CCCGAACAGG
AAGGCCGGTG ACCGGATCAA GACCGCGATT CACGATTTCG AAGGCGATCA GACCTATACG
GAAAAACCCG GCCATCAATT CACGCTGAAC GCCACCTTCG ACGACGCCGA TCCGCGCCAA
TACGACGCGC TGGCGATCGC AGGCGGCCGC GCGCCGGAAT ATCTGCGGCT CAATCCCAAG
GTGATCGAAG TGGTGCGGCA ATTCGCCGAG GCAGGCAAGC CGATCGCCGC GATCTGCCAC
GCCGCGCAAC TGCTGGCCGC CGCCGACGTG ATCCGCGGCA AGCGCATTTC GGCGTACCCG
GCCTGCGCGC CCGAAGTGAA AATGGCGGGC GGCGAATACG CCGACATTCC CGTCGACGCC
GCGATCACCG ACGCCAATTT CGTCACCGCC CCGGCGTGGC CCGCGCATCC CGAGTGGCTG
CGCCAATTCC TCGTGCTGCT CGGCACTCGC ATCGAGCTCT GA
|
|---|
| Protein sequence | MAAKKILFLT GDFAEDYETM VPFQALQAVG HVVDAVCPNR KAGDRIKTAI HDFEGDQTYT
EKPGHQFTLN ATFDDADPRQ YDALAIAGGR APEYLRLNPK VIEVVRQFAE AGKPIAAICH
AAQLLAAADV IRGKRISAYP ACAPEVKMAG GEYADIPVDA AITDANFVTA PAWPAHPEWL
RQFLVLLGTR IEL
|
|---|
| |