Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2652 |
Symbol | |
ID | 4005585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 1999582 |
End bp | 2000286 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637946969 |
Product | putative type IV secretion system protein VirB8/TraJ |
Protein accession | YP_558359 |
Protein GI | 91783153 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0159035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CGCACGACTA CGGGCGTGTG CTCGACATCG AGACGTCGCT CACTCACCTG CAGGAACGCT CCGAGCGGCG GGCCTGGCAC GTCGCCTATG CAGCGGTCGG CGTGGCCGTG CTCAGTACCG CAGCACTCGC GGTGATGGTG CCGTTCTATC GCGTCGTGCC GCTGCCGATC GAGGTCGATC GCCTGACGGG TGAGTCTCAG GTCATCGATG TGCTCGATGC CCACCATGTG CATACGAAGG AAATCCAGGA CAGGCACTGG GTCGAGACCT ATGTGCGTGC GCGCGAGCGT TACGACTGGG GCCTGCTGCA GATGGACTAC GACAACGTGC TCACCATGAG CGATGACGTG GTCGCGCGCG ATTACCGCGG CACCTACAGC GGTCCCGACG CGCTGGACCG GCAACTGGGG TCCGGCGCCG AGCGGCGTGT TCGCATTCTC TCAATCACGC TGCCGCCAGA CGAACCGGGT CACGCGGTCG TGCATATCGA GCGCACATCG TTCAGGAACG GCCAGGCCGA CGCCGAGCCG ACGCAGCGTT TCGTGATCAC GTTGGCCTAT ACCTATCAGC CATCCGTGTT CACGCGCGAG AGCGTGGCCA TTGCCAATCC GTTCGGATTC AAGGTCACGG CCTACAGCCG CGATCCCGAA TACACGCCGC AGGCGTCGGC GTCGAATGCC GGAGTTAAGC CATGA
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Protein sequence | MSAPHDYGRV LDIETSLTHL QERSERRAWH VAYAAVGVAV LSTAALAVMV PFYRVVPLPI EVDRLTGESQ VIDVLDAHHV HTKEIQDRHW VETYVRARER YDWGLLQMDY DNVLTMSDDV VARDYRGTYS GPDALDRQLG SGAERRVRIL SITLPPDEPG HAVVHIERTS FRNGQADAEP TQRFVITLAY TYQPSVFTRE SVAIANPFGF KVTAYSRDPE YTPQASASNA GVKP
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