Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2445 |
Symbol | |
ID | 4003605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 2219293 |
End bp | 2219973 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637947195 |
Product | putative IS3 type transposase integrase (orfB) |
Protein accession | YP_558579 |
Protein GI | 91783373 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00380003 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.181797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGTACG CGTTCATCGA GCGCAATCGA CACCACTGGC CGGTCTCGGT GCTATGTGAA GTGCTGGAAG TCAGTCCCAG CGGATATCAT CAGCGCAGGC AACGCACCGC GCAGGCCAAG CCGCACCGAG GCCGCGTGAG TGACGACGCA CTGCTTGCGC ACATCAAGAC GATTCACACG CAGGTCAGGG GCGAATACGG CTGGCCGCGC ATGTGGAAGG AGCTGCTCAC GCATGGCGTG CGCGTGGGCA AGGAGCGGGT TCGCAAACTG ATGGCACAGC ATGGCATTCG AGCCCGGCAC AAGCGCAAGT ACATCGCGAC GACAAACTCG AACCACGATT TGCCGGTTGC GCCAAATCTG CTGGAGCGCA ATTTCACTGC AACTGCACCG AACCAGGTCT GGACGACCGA CATCACGTAT CTGGCGACAG CCGAGGGCTG GGTGTACCTC GCGGTCATCA TCGACCTGTT CAGCCGGCAG GTGGTGGGCT GGTCGATGCA GCCGCACATG AAGGCTGAAC TGGTCACGGA CGCATTGCGC ATGGCGTGGT TCCGACGCCG CCCTGAAGCC GGCGTAATCG TGCATAGCGA CAGGGGCAGC CTGCCGCGCG TCAAACAAGA TGAGAGCAGC GCGTCAATCT GGATGAGAGT ACTGGCGTTG CGGCAGCGGT GGAGGGCGTA G
|
Protein sequence | MKYAFIERNR HHWPVSVLCE VLEVSPSGYH QRRQRTAQAK PHRGRVSDDA LLAHIKTIHT QVRGEYGWPR MWKELLTHGV RVGKERVRKL MAQHGIRARH KRKYIATTNS NHDLPVAPNL LERNFTATAP NQVWTTDITY LATAEGWVYL AVIIDLFSRQ VVGWSMQPHM KAELVTDALR MAWFRRRPEA GVIVHSDRGS LPRVKQDESS ASIWMRVLAL RQRWRA
|
| |