| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1819 |
|---|
| Symbol | |
|---|
| ID | 4003805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2901487 |
|---|
| End bp | 2902581 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637947814 |
|---|
| Product | OmpC family outer membrane porin |
|---|
| Protein accession | YP_559195 |
|---|
| Protein GI | 91783989 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.223264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.224519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CGTTCTGTAC TGCAGCGATA CTTTCGTGCG CAGCGGCCAC CGCACACGCA
CAGGGAAGTG TCACCTTGTA TGGCCTGATT GACGCCTCCG TTCAGTTCAC AACCAACCAG
GACGGCGGAA AAACATGGGC GATGAGCAGT GGCACAACGC GCGGCAGCCG CTTCGGCTTG
CTCGGAAGAG AAGACCTTGG TGGCGGAACC CGCGCAGTTT TCCGGCTTGA GAACGGCTTT
GACGTCACGG ACGGTTCGCT CGGCCAGGGC GGTTTGATGT TTGGCCGTCA AGCCTATGTC
GGAATCGAAA ACGACAGCTG GGGCGCCTTG ACCTTCGGCC GCCAGTACGA GTCGATGGTG
GACTATGTGG CCCACCTCAC GGCCGCCGAC TGGTCGGTCT ATATGGAACA CCCGGGCGAC
ATGGATCTGA CGAACCGCGG CGTGCGTGTC GATAACTCCG TGAAGTACAC GAAAAGCTAC
GGCGCCTTCA CAGGAAGCGC GCTGTACAGC TTCGGCGGTC AGGCGGGGAG TTTTGGCAAG
GACAGCATGT GGAGCCTTGG CGGCAGCTAC GACGACGGCC CCCTGTACGT CGGTTTCGGC
ATGACTTACG CCCGTCAGCC CGGCGACCGG TCCGCCGGGA CCTTCTGGAA AGCGACGAAC
TCCGCCATTG GCGAGTTCGT GACGGTTGCA CATTCATTCC TGACTGTCGG CGGCGGCGCC
GCCTACAGGT TCGGCTCGAT CAAGCTCGGT GGCGACATCA CGAGTACCAC CTACAAGGAT
GGCTTCGAAG GTCAGAACGT CAACTTCATG AACTACGAGC TCAACGGGGT GTATTACTTC
ACCCCGGCGT TCTCTGCCGG GCTGGGCGCC ACCTACACCG ACGGCAAGAT CGACGCCAAC
GACGGCGATC CCCGCTACAT CCAGTACAAC GCTACCGCCA CCTATAGCCT CTCCAAACGC
ACGGATCTTT ATGCGTTTGC CACATTCCAG CGTGCTATGG GTGACGCGCA GGTCGCTCAG
GTCACGCAGT TTATTTCCCC ATCGAACAAC CAGAAGCAGG CGTCAATAGG CGTCGGCCTG
CGCCACAGCT TCTGA
|
|---|
| Protein sequence | MKKTFCTAAI LSCAAATAHA QGSVTLYGLI DASVQFTTNQ DGGKTWAMSS GTTRGSRFGL
LGREDLGGGT RAVFRLENGF DVTDGSLGQG GLMFGRQAYV GIENDSWGAL TFGRQYESMV
DYVAHLTAAD WSVYMEHPGD MDLTNRGVRV DNSVKYTKSY GAFTGSALYS FGGQAGSFGK
DSMWSLGGSY DDGPLYVGFG MTYARQPGDR SAGTFWKATN SAIGEFVTVA HSFLTVGGGA
AYRFGSIKLG GDITSTTYKD GFEGQNVNFM NYELNGVYYF TPAFSAGLGA TYTDGKIDAN
DGDPRYIQYN ATATYSLSKR TDLYAFATFQ RAMGDAQVAQ VTQFISPSNN QKQASIGVGL
RHSF
|
|---|
| |