| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1678 |
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| Symbol | |
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| ID | 4003351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 3051239 |
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| End bp | 3053188 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637947948 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_559329 |
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| Protein GI | 91784123 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.151173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0771799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCA AATTAACAGC CAAGCACCCG CGGCCGGCTT CGTCCGAACG CGCCCCTGTC
CGTACCGGAA GCACCTCGGC GCGTAAGCCG ACGCGGCCGG CGGGACCGAA ACCGTCTGTA
GCGACGGATT CCGGCGACGC GCGGGGCAAG CGGGCCGGTG CCGCTCCGGC GGGCGGCAAG
CGGCCGACCG GCGGTAAGCC GGCGGGTGCA GGCGCGCGCG CGCCGCGCGC TGAAGGGTCG
TTCTCACGCG AGCGTGATGC GGGTGGTGCG GGCGCAGCGC GCCGGGCGCC GTCGGACCGG
GCGCCGCGGC GTGAGGACGG CGGCGGCGCG CCGCGGCGTT TCGAAGGCGC AAGTGGTCGC
GGTCCGCGTC GAGACGATGG TGAGCGTGCA CCGCGCAGGT TCGAGGGTGG CGGTGAGCGT
AGCGAACGCG CGCCTCGTCG CGTCGAAGGC GGCGCCGAGC GCAGTGAACG CGCACCTCGT
CGTTTCGAAG GCAGCGCCGA GCGCAGCGAA CGCGCACCTC GTCGCGTCGA AGGCAGTGTC
GAGCGCAGCG AACGCGCACC ACGCCGTTTC GAAGGCAGCG CCGAGCGCAG CGAACGCGCA
CCGCGCCGGT TCGAAGGCAG TGCCGAGCGC AGCGAACGCG CACCACGCCG TTTCGAAGGC
AGCGCCGAGC GCAGTGAACG CGCACCACGC CGCGTCGAAG GCAGCGCAGG CCGACCGCCG
GAAGGCAGAG CTCGCGGCGA GCGTCCAGTA CGCAGCGCGG CGAGCGGAAG CACCGATCGG
CCGCGCTCTG GCGGTGACCG GGCTCCGCGC GGCGATACCA CGCCGCGCCG TTTTGAGAAC
GACCGCGGTT CGCCGGAGCA CCGTGAGCGC AGCTTCGCCA AACCCGTCAA AGGCGCGTAT
ACCGACCGCT CGGACCGTCC GGCACGCGCC CCGCGGGACG ATCGCGGCGA ACGCGCGCCG
GCCAAACGCG AGTTCGGCGA TCGCGCTCCC CGCAGCGGCG AGCGCGCGGA ACGTGGCGAA
CGGCCGGCAC GCGGTTTCGA CAGATCGCTG CCGACTGCCC CGCGCCGCTT CGGAGACGAC
CGGCCCGCAC GCGCCGACAA GCCTCGCGGC ACATCGCCCG CCGCCCATAC AAAACGCGAC
GCCGCTGCCG GCGATGCGCC GCGCACACCG CGTCGCGATT ACGAAGACGC ACCCGGCACC
CTGCGCCTGT CCAAGCTGAT GTCCGAACTC GGCTTGTGCT CGCGCCGCGA AGCCGACGAA
TGGATCGAGA AAGGCTGGGT GCTGGTGGAC GGCGAGCGCA TCGACACGCT CGGCACCAAG
GTTCGTCCGG ACCAGCGTAT CGAGATCGAC CCTGCCGCCG AAGCCGCACA GGCGAGCCAG
GTGACCGTGC TGATCCACAA GACGGTGGGC TTCGTCTCCG GTCAGGCGGA AGACGGTTAC
CAGCCGGCCA TCACGCTGGT CACGCCGGAA AACCGCTGGG AAGGCGATCG CTCGAACATC
CGCTTCTCCG TTGCGCATTT GCGCCAGCTT GCGCCGGCCG GGCGGCTGGA CATCGATTCG
ACGGGCCTGC TGGTGCTGAC GCAGGACGGC CGTATCGCGA AGCGGCTGGT CGGCGGCCAT
TCGGAGATCG ACAAGGAGTA TCTCGTGCGC GTGGCATTCG GCGAGCACAC GACCGACGTC
GAAAGCCACT TCCCGCCGGA AAGCCTCGCG CTGCTGCGGC ATGGCCTCTC GCTCGACGAC
GTGCCGCTCA AGCCGGCACA GGTCAGCTGG CAGAACGGCG AGCAATTGCG TTTTGTGCTG
CGCGAAGGCA AGAAGCGTCA GATTCGCCGC ATGTGCGAAC TGGTCGGCCT CGAAGTGATC
GGCCTGAAGC GCGTGCGGAT GGGCCATGTG ATGCTGGGCG CGCTGCCGCC GGGCCAATGG
CGCTACCTCG CAGCCGACGA ATCGTTCTGA
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| Protein sequence | MRVKLTAKHP RPASSERAPV RTGSTSARKP TRPAGPKPSV ATDSGDARGK RAGAAPAGGK
RPTGGKPAGA GARAPRAEGS FSRERDAGGA GAARRAPSDR APRREDGGGA PRRFEGASGR
GPRRDDGERA PRRFEGGGER SERAPRRVEG GAERSERAPR RFEGSAERSE RAPRRVEGSV
ERSERAPRRF EGSAERSERA PRRFEGSAER SERAPRRFEG SAERSERAPR RVEGSAGRPP
EGRARGERPV RSAASGSTDR PRSGGDRAPR GDTTPRRFEN DRGSPEHRER SFAKPVKGAY
TDRSDRPARA PRDDRGERAP AKREFGDRAP RSGERAERGE RPARGFDRSL PTAPRRFGDD
RPARADKPRG TSPAAHTKRD AAAGDAPRTP RRDYEDAPGT LRLSKLMSEL GLCSRREADE
WIEKGWVLVD GERIDTLGTK VRPDQRIEID PAAEAAQASQ VTVLIHKTVG FVSGQAEDGY
QPAITLVTPE NRWEGDRSNI RFSVAHLRQL APAGRLDIDS TGLLVLTQDG RIAKRLVGGH
SEIDKEYLVR VAFGEHTTDV ESHFPPESLA LLRHGLSLDD VPLKPAQVSW QNGEQLRFVL
REGKKRQIRR MCELVGLEVI GLKRVRMGHV MLGALPPGQW RYLAADESF
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