| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1319 |
|---|
| Symbol | |
|---|
| ID | 4005493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3468449 |
|---|
| End bp | 3469735 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637948315 |
|---|
| Product | branched chain amino acid ABC transporter inner membrane protein |
|---|
| Protein accession | YP_559686 |
|---|
| Protein GI | 91784480 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACG CGCCCGACTC GTCGGCTTTG TCCGCGACCG CACCGCGTGC GCTCTGGCGC
GTGCTCGCGC CGTGGCTGGC GCTCATCCTG TTCCTTGGCG TGCCGCCATT CGTCTGGCCG
CAAAGCTGGC TGCTCGCCTA TCTCGCGCAG ACCGCGGCGA TGATCGTGTT CGCGCTTTCC
TACAATCTGC TGCTCGGCGA GACGGGGCTG TTGTCGTTCG GCCATGCCGC TTACTCCGGC
CTCGGCGCGC TCGTGGCCGC GCAACTGTTC AACCGGATCG GCGTGCCGCT CGTGCTGCTG
CCGCTGGTTG GCGGTATCGG CGGCGCGCTG TGCGGCGTGC TGTTCGGTTT CATTTCCACC
CGGCGCGCCG GCACGGCCTT CGCGATGATC ACACTCGGTC TGGGCGAACT CGTGGCGGCC
GCCGCGTGGA CGCTGCCCGA CTGGTTCGGC GGCGAGGCGG GCGTGGCGAT CGATCGCGCG
AGCGGCGCGC AGTGGGCAGG CTGGAGCTTC GGCCCGGCGC GCGAGGCCTA TGCGCTGATC
GCCGTGTGGT GCCTGCTCGC GTGCGCGGCG CTGTTCGCGC TCTCGCGTAC GCCTTTCATG
CGCCTTGCCA ACGCCGTGCG GGACAATCCG GTGCGGGCGG CGGCAATAGG CTGCTACCCG
CGCCGCATCC GCTATGGCGT GGTGGTGGTG TCGGCATTTT TCGCGGGTAT CTCGGGGACG
CTGGCGCTGA TCAACGTGGA ACTGGTGTCG ACGGAAAGCG TCGGCATGAT GCGCTCGGGC
GCGGTGTTGA TCGCCACGGT GATCGGCGGC ACGGCGGCGT TTTTCGGGCC GGTCGCGGGC
GCGGTCGTGC TGACGTTTTT CAGTGTCGCG GTGGCGAGCG TCACGCGGGC CTGGTTGTTC
TATCTGGGAC TCTTCTTCAT CGTGGTCGTG GTGATGTCAC CGGATGGCCT CGCGGGCTTC
GTGCAGCGTC ATACGGCGCG TGTGGCCGCA TATGGCTGGC GCCGGTGCCG CGTGGCTTAT
CTGTGGGGCG CGGCCGCCGC GCTGCTGTGG ACGGCGGCCG TCGTGCTCGC GATGCAATGG
GCCTACGCCG CGCAATTCGG CGCGGACGAC GGCGCGGCTT GGGTCGGCAT GGGCGCGCTG
ACGGGGATGG GCGCGTCGCC GCTCGCACTC GCAATCCTGT TGCTGGCCGC GCTCGGAGGA
CTCTCGGCGC ATTACGCGAT TCGAGCGCAA GCGCACCTCG CAGCCATGCG CTCAAGCGCC
ACGCACAGCG CCGGAGACGC GCGATGA
|
|---|
| Protein sequence | MRDAPDSSAL SATAPRALWR VLAPWLALIL FLGVPPFVWP QSWLLAYLAQ TAAMIVFALS
YNLLLGETGL LSFGHAAYSG LGALVAAQLF NRIGVPLVLL PLVGGIGGAL CGVLFGFIST
RRAGTAFAMI TLGLGELVAA AAWTLPDWFG GEAGVAIDRA SGAQWAGWSF GPAREAYALI
AVWCLLACAA LFALSRTPFM RLANAVRDNP VRAAAIGCYP RRIRYGVVVV SAFFAGISGT
LALINVELVS TESVGMMRSG AVLIATVIGG TAAFFGPVAG AVVLTFFSVA VASVTRAWLF
YLGLFFIVVV VMSPDGLAGF VQRHTARVAA YGWRRCRVAY LWGAAAALLW TAAVVLAMQW
AYAAQFGADD GAAWVGMGAL TGMGASPLAL AILLLAALGG LSAHYAIRAQ AHLAAMRSSA
THSAGDAR
|
|---|
| |