| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1131 |
|---|
| Symbol | clcR |
|---|
| ID | 4002993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3649227 |
|---|
| End bp | 3650111 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637948502 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_559867 |
|---|
| Protein GI | 91784661 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTC GGCAGCTTCG CTATTTCATC GCGGTCGCAG AAGAGGGAAA TATCGGTGCT
GCGGCAAGAC GCCTGCATAT TTCCCAGCCG CCCATTACCC GCCAAATACA GGCCCTGGAA
CAGGATCTCG GCGTGGTGCT GTTTGAACGC ACGCACCGCG GCGTCGAATT GACGGCAGCG
GGTACAACAT TTTTAGAGGA TGCCAGGCGC CTACTGCACG TTACCGAGAT CTCAAGGGTG
AGATCACGTG CAGCATCGCG CGGTGAAATC GGGGAATTGC GCATCGCCTA TTTCGGAACC
GTCGTTTTGC ATACGCTACC GCTACTGCTG CGGCAACTCT TGTCGGTTGC TCCCTCGGCA
ACTGTGTCCT TGACGCAGAT GAGCAAGAAC CGCCAGATTG AAGCGCTGGA CGCTGGCACC
ATCGATATCG GGTTCGGGCG TTTCTACCCC TATCAGGAGG GTGTAGTTGT CCGAAACGTA
ACCAATGAGA GGCTATTTCT GGGTGCGCAA AAGTCGCGCG CTCGCTCGTT TGGTGAGCAA
GTTCATTGCA GCGCGCTTCG TAACGAGCCC TTGATCCTGT TCCCGCGAGA AGGACGCCCC
AGTTTCGCAG ACGAAGTCAT CGGCGTATTC AAAAACGCGC GAGTGGAGCC AAAGGTTGTC
GCCATAGTTG AAGACGTCAA TGCAGCCATG GCTCTGGCGT TGGCCGGCGT CGGCGTGACA
ATTGTTCCCG AGACAGTAGC CATGATTTCG TGGCCTGACT TCGGCTTCAC TGAACTCGTG
GGCTCCAAGG CCACTGTACC GGTCAGTTGT ATCTACCGTC ACGATCACAT TGCGCCGATT
CTGAAAACAT TCTTGAACTT GCTACCTATT CGAGAATCGC AATAG
|
|---|
| Protein sequence | MEFRQLRYFI AVAEEGNIGA AARRLHISQP PITRQIQALE QDLGVVLFER THRGVELTAA
GTTFLEDARR LLHVTEISRV RSRAASRGEI GELRIAYFGT VVLHTLPLLL RQLLSVAPSA
TVSLTQMSKN RQIEALDAGT IDIGFGRFYP YQEGVVVRNV TNERLFLGAQ KSRARSFGEQ
VHCSALRNEP LILFPREGRP SFADEVIGVF KNARVEPKVV AIVEDVNAAM ALALAGVGVT
IVPETVAMIS WPDFGFTELV GSKATVPVSC IYRHDHIAPI LKTFLNLLPI RESQ
|
|---|
| |