| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0678 |
|---|
| Symbol | |
|---|
| ID | 4005732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4134210 |
|---|
| End bp | 4135994 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637948952 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_560308 |
|---|
| Protein GI | 91785102 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.206131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCC CTTTCGCGCG CTACCTGTCC TTCATTCTGC TGGCTCTCGC GTTGGTGCTG
CCTTACGCAG TTGTCAACCA TACTTATCCG ATTCCGACGT TTTACGCTGA ATTCACGGCA
CTCGCGCTGT ATCTGCTGAC CGGCGCGGGC GTCGTGCTGC TGGTGGCGAG CGCGAGGCCG
CGCGTGACGT TCGCGTCGCC GACGGTCGCG CTGGTGCCGT TGCTGTTCGG GCTGCTGCTG
GTGGCGCAAT CGGTGGTGTT GCCGGTTTCG CAGCCGTCGA TGAACTGGCT CGGCGGCGGC
TATCTGCTGG CGGCCTTCAT GGCGACGCAT GCTGGTTATG GTTTCACGCG GGCCAGGCTC
AACGAGACCG CGTTGCGCTG GGCGGCCGGG GCGTTGATCG TCGGCGGGCT GTTTGCGGTG
TTCTGCCAGA TCATTCAGCT GTTTCACCTC GAAACGCGCG TTTCGCCGCT CGTCGTTGCC
TATAACGTGA CCGTCGAGCG CCGGCCGTTC GGCAATATGG CCCAGGCCAA TCATCTCGCT
ACCTATATCG CATTTGCGAT GGCGGGCGCA CTGTTCCTCG TGCAGACGCG GCGGATCGCC
GTCAGCATCT GGTTCCTCGT GTCGACGATT TTCGCGGTTG GCCTTGCGCT GACCGTCTCG
CGCGGGCCCT GGCTGCAAAT GGGCGTGATC GTGGCGGCGG GTTTCTGGAT GGCATTCGCG
CAGACCCGCA ATCAGTTGCA GCTACGCCGC AGCAATCGCG AGTGGATCAT TCCGATTGTG
CTGGCCGTGC TATTTTTCGT GGTCAACGCG CTGATTCGCT GGGCCAACGT TCGCTACCAC
CTGGAGCTCG GACAGTCCGC CGCGGAACGC TTCAAGGACG CCGGCCAGAT CGCGCCGCGT
CTCGCGCTGT GGAAGTACGG CTGGACTATG TTCAGAACGC ATCCGCTGCT GGGTGTCGGT
TGGGGCGAAT TTCCGAGCTA CCAGTACGAG TTTGTGAAGT CGCTCGGCGC CGTCGAGATC
GCCAACAATT CGCACGACAT CTTCATCGAC CTGCTCGCGA AGACTGGCTT GCTCGGCCTC
GCGATCGTGC TGTTCGGCCT GATCACATGG CTCGTGCGGG TGGTGCGCGC ACCGCAAAGC
TCGGCGCGCG TGTTCGGCAT TGCGCTGATC GGTGTGCTGG TCATGCACGC GCTGGTCGAA
TATCCGCAGC AGTACATGTT CTTCCTGTTG CCGGCAATGT TCGTGTTCGG CTTGCTGGAA
ACGCGGCCGC TGCGCCTCGT GCCCGCACGC GTGTCGTTCG GCGCGTTTGC CGTGGTGGTG
TTCGGCGGGC TGGCGGCGCT GTATCCGGTG TATCGCGATT ACGCGCGCGC CGAGGTGTTG
TACTACGGCT CGCGTCCAGC CGAGCAGTAT CGTGCGGATC CGTCGTTCCT GTTCCAGGCG
TGGGGCGAGT ATGGAATGGC GACGCTTTTG CCGATGAACC CGATGGACCT GCAGCACAAG
CTCGCCATGC ACAGACAGGC GATTGCGCTG CTGCCGGGCG AAACCGTGTT GCGCCGCTAT
GCGGTGCTGC AGGCGTTGAG CGGCGACCAG AAGGCGGCGT TCGACACTGT CGAACGACTG
AAGATTTTCG CCGGGGAACT GAAGGACTGG CCGTCGCAAC TGAGCTATCT GTACGAACTC
TGCGACGAGC AGAAAACGCT GACCGGTTTC AAGGCGGAAC TGGTCAAGCG CTACGGTATG
CCGCCAGGCG ACATCAATGA AGACGACGAC AGCGACGAGG ATTGA
|
|---|
| Protein sequence | MPTPFARYLS FILLALALVL PYAVVNHTYP IPTFYAEFTA LALYLLTGAG VVLLVASARP
RVTFASPTVA LVPLLFGLLL VAQSVVLPVS QPSMNWLGGG YLLAAFMATH AGYGFTRARL
NETALRWAAG ALIVGGLFAV FCQIIQLFHL ETRVSPLVVA YNVTVERRPF GNMAQANHLA
TYIAFAMAGA LFLVQTRRIA VSIWFLVSTI FAVGLALTVS RGPWLQMGVI VAAGFWMAFA
QTRNQLQLRR SNREWIIPIV LAVLFFVVNA LIRWANVRYH LELGQSAAER FKDAGQIAPR
LALWKYGWTM FRTHPLLGVG WGEFPSYQYE FVKSLGAVEI ANNSHDIFID LLAKTGLLGL
AIVLFGLITW LVRVVRAPQS SARVFGIALI GVLVMHALVE YPQQYMFFLL PAMFVFGLLE
TRPLRLVPAR VSFGAFAVVV FGGLAALYPV YRDYARAEVL YYGSRPAEQY RADPSFLFQA
WGEYGMATLL PMNPMDLQHK LAMHRQAIAL LPGETVLRRY AVLQALSGDQ KAAFDTVERL
KIFAGELKDW PSQLSYLYEL CDEQKTLTGF KAELVKRYGM PPGDINEDDD SDED
|
|---|
| |