| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5496 |
|---|
| Symbol | |
|---|
| ID | 4016455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | - |
|---|
| Start bp | 246066 |
|---|
| End bp | 247121 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637945116 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_552248 |
|---|
| Protein GI | 91791298 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000328707 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.790551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAA TTGCCAAGCA AACGTTGGAC AAGATTTGCT TGTTCACACT CAACTGTCGC
CTCTTTCACG GCAACAGAAA GCTCAGTTCC GCAGACCTGC AGTCGGCCCT CAATGTCACC
ATTGATGTCG ACAAAACAAA GCAAGTCATG GCGCTGGGTG TCAAACGCGT CTTCGACAAG
GCAGAGCTGG CAAAGCTCGG CGCTGTCAAA GGCGCAATGC AACGGGCGTG CTCCTCCATT
GGCGCTCCGT TCCTGGGTGG CTTTGCTATC CCAGACCACA AGGCGCAGGA CCTGGCCAAG
GAGCTCAACG TGCTCGTGAC CAGAGGCCTG AGTCTCAAGG CCGACCTGAT GGCACGCTAC
CCGCAGATAC TTGACAAATT TGCCAAGCAA AATCCGCGGT GGGAAGCGAT CATCAAGGGC
AATGCCTTCG ACATCGCCTA CGTCGACGCC CAGATCCAGT TTGACTGGGA TGGTGTTCGT
ATTTCAGCGG GTGACGAAGG TGGGCTGATG GCCAAGGGCC TCGAAAGCAA AGTCGGGGGT
CTCCTCGGCA ACCTGCTCAA CGACATCGCC AAGGCCTCGA GCAAGCTTCT CGATGAAAGC
CTGAAGAATC GCGACGGTGT CACCCGCAAG GCCTTCCGCC CGCTGTTGGC TATGGCCGAC
AAGCTCGACG GGTTCAACTT TGTTGATCCC AGAGTCGGGG CACTGGCAAG CATGATCCGT
CATGTCTTGT CCGTGATGCC GCCTGAGGGG CGCATCGAGG GTGCTGACCT CCGGAATCTT
TATGGACTCA CCTCCATACT GAGCTCCCCG GATCAAGCGC TGGTCATCGG CACGAAAGTG
ACCGAATCCG ACGTTGCGAT GGTCTACGAC GAAGCTTTTG GCCAGCCGTA CAAAGCGGTC
GCGCCAAAGG CCTTGGCAGT GCCAGCGCCC TCGCAGCCGT TTCCGAAGGC GCCAGGACTG
TTTGAGGCCA CTCCCGGCTT CGAGCAGCCA CGAGGTCCGG CATTCCAGCC GGTCGCCTAC
ACGCCGCCTC CAGCGGCGAA CTTTTTCAAC TTCTGA
|
|---|
| Protein sequence | MAQIAKQTLD KICLFTLNCR LFHGNRKLSS ADLQSALNVT IDVDKTKQVM ALGVKRVFDK
AELAKLGAVK GAMQRACSSI GAPFLGGFAI PDHKAQDLAK ELNVLVTRGL SLKADLMARY
PQILDKFAKQ NPRWEAIIKG NAFDIAYVDA QIQFDWDGVR ISAGDEGGLM AKGLESKVGG
LLGNLLNDIA KASSKLLDES LKNRDGVTRK AFRPLLAMAD KLDGFNFVDP RVGALASMIR
HVLSVMPPEG RIEGADLRNL YGLTSILSSP DQALVIGTKV TESDVAMVYD EAFGQPYKAV
APKALAVPAP SQPFPKAPGL FEATPGFEQP RGPAFQPVAY TPPPAANFFN F
|
|---|
| |