| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5471 |
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| Symbol | |
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| ID | 4016430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 222200 |
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| End bp | 224107 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637945091 |
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| Product | hypothetical protein |
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| Protein accession | YP_552223 |
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| Protein GI | 91791273 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.170815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAC TGAAAGCCGA CTCACTCTTT CGCCCCGTTT TCGAAGGTCG GGCAGCCTTG
GCCTGGTCCC TCGCGCTGCT CTGGATCGTG GGACTCGCGC TGTTTTCCAA CCTGTCAGGG
ACGGCTATGG CGATGATGCT GTTTTTCGCC ATGTTCATGA TGGTCCTGCG CTACTACCAG
GCTGCGCAGG TATGGGACTA CAAAGTCCGC CTGTCCGGGG CCGCGATCGA CAAAGTCAGC
ACTTCGCAGC TGGACGGCGT GCAGAAGCAG CTGCAGGACA GCGTATGGCT CGGCTGGGGA
TGGGAGTGGC AGCCTAGCCA TACACAGCAG GCCTACGACA TCCTGAAACG GGACACCGAG
GAGATCTATC CCCCCAACTG GTTCCTCAGG CTGAAAGGCG TTAAGTTCGA TCCGCGCGGC
ATGAAGGGCC GCCAGTGGGT GCACGGACTC GGCACCGAAA AAGATGTAAT TGTTCCGTTC
ACCGGCTTTG CTGGCCACAC GGCCATTGCG GCGACGACAG GTGCGATCAA GACCAGCTTG
TACAAACTGC TCGTCTACCA ATTCGTGCGC GCGGGCGACA CGGTCATCAT CATCGACCCG
AAAGGGGACA AGGATTTGAA AGCGATTGGA CAGGACGCGG CGACCGCCTG CGGGGATCCC
TCGCGCTTCA TCAGTTTCCA TCCGGCATTT CCAAGCCAAG GTGTGCGTTT CGACGGCCTG
AAGAACTGGG AGCGTGAATC CCAGGTAGCT TCTCGAATCA CGCAGATCAT CAGCGCCGGT
GAAGAAGGAA ACAACTTCAT CGACTTTTGC TGGCAGGTTA TTACGAGCAT TGTGGCCTGC
ATGAAGATCA TTGGGCGCCG GCCGACGATT GCGTCAATCC TCGACCATAT CCGCGCCCTG
GATAACTCCG AGAAGCTGTG TGAAGACGTC CTGGTCCAGT GGCTCACGCC TCGCGTCGAC
AACTTCTCGT CGCAAATCAA CGAGAAGATC CAAAGCATCA CGTCCGCGCA GAACGCGAAG
GGCGGCAGAG CCAAGTCCAC CTTCGCAGAG AAGGCTGAAC CGCGACTGTT GGCCTTGATC
GCCTTCTTCA AGGAATACCA GGGTCCGAAA CCAGCGGAGA TCGATAGCCT CATTGGCAAT
CTGGAGTCAA ACCGCGAGTG GTTCGGGAAG ATGATCGTTG CCCTGACGCC AACGCTGACA
AAGCTGTCCA CCGGAGACCT TCGCGGGATG CTCTCGCCGG ACTATGACGA TCCGACGGAT
CTCCGGCCTA TCTATGACAT GGGGAAGGTC ATTCAGGAGG GGAAGATCTT CTACATGGGC
ACGGACGCCC TATCGGATCC GGCCGTGGCC TCCGCAATCG CCGCATTTGC GATTTCGGAT
CTTGCCGCCG AAGCGGGCTC TCTCTACAAC TACACCGAGC CCGGGCAGAA GCGCCAAAAG
CGCGTTCACC TTCTAATCGA CGAAGGGTCG AATGCGATCT GCGCGCCGCT CATTGAGATC
TGCAACAAGG GGCGCGGCGC TGGCATCCAC GTCTACCTTG CGTTCCAGGC GTTCAGCGAC
ATCGTCACCA AAATGGGCGG GGATGTGAAC GCCGCAAAGC GATTCATGGC CAACATGAAC
AACCTGATTG TGGGCGCCAC ACAGGACACC GACACCCTGG ACCTGATCTC GGACAAGTTC
GGCGAGGTCG ACGTCGTTTC GGCCAATCGC TCGCAGGGTT CCGGTCAGAA AACGGAGGAC
GTTGGGTTGG AGTACTCGGC GACGAAGAGC ATCAGCTTTA GCGAAAAGAA TCGCGTGATG
ATCCCACGCA GCGTGCTGAT GTCTATGCCT GACCTCCAGT ATGTTGCAGT CGTAAACAGG
GCCAAGATCT TCAAAGGCCG CATCCCAATT CTCGAATTTC AAAATTAA
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| Protein sequence | MRELKADSLF RPVFEGRAAL AWSLALLWIV GLALFSNLSG TAMAMMLFFA MFMMVLRYYQ
AAQVWDYKVR LSGAAIDKVS TSQLDGVQKQ LQDSVWLGWG WEWQPSHTQQ AYDILKRDTE
EIYPPNWFLR LKGVKFDPRG MKGRQWVHGL GTEKDVIVPF TGFAGHTAIA ATTGAIKTSL
YKLLVYQFVR AGDTVIIIDP KGDKDLKAIG QDAATACGDP SRFISFHPAF PSQGVRFDGL
KNWERESQVA SRITQIISAG EEGNNFIDFC WQVITSIVAC MKIIGRRPTI ASILDHIRAL
DNSEKLCEDV LVQWLTPRVD NFSSQINEKI QSITSAQNAK GGRAKSTFAE KAEPRLLALI
AFFKEYQGPK PAEIDSLIGN LESNREWFGK MIVALTPTLT KLSTGDLRGM LSPDYDDPTD
LRPIYDMGKV IQEGKIFYMG TDALSDPAVA SAIAAFAISD LAAEAGSLYN YTEPGQKRQK
RVHLLIDEGS NAICAPLIEI CNKGRGAGIH VYLAFQAFSD IVTKMGGDVN AAKRFMANMN
NLIVGATQDT DTLDLISDKF GEVDVVSANR SQGSGQKTED VGLEYSATKS ISFSEKNRVM
IPRSVLMSMP DLQYVAVVNR AKIFKGRIPI LEFQN
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