| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5468 |
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| Symbol | |
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| ID | 4016427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 219897 |
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| End bp | 220871 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637945088 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_552220 |
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| Protein GI | 91791270 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0233856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGC AATCCTTGGC ACTCGACTAT CTGGCTCCTG TCATGGAGCT CCTGCGCGCG
GCTGATGTCA CAGAGGTGAT GATCAACGGC GCGGACAAAG TCTTCGTCAA GAGATATGGG
TCTAAAAAGC ACCGGGTCGA CATCAAGATC AGTGACCAGG AAATCTCGTC TGCGATCACC
AATCTCGCCT CAATCAGCTT TCGCGAGGTA GGCGTTGGCA ACGCCACCGG GCACAAGATC
ATAAGTGCGC AGCTTCCGGG CTACCGGATT GAGGCATGGC TTTCGCCGGT CGCAGTGATG
GGATCGTGCC TCACCATTCG GAAGCTGGGC TCTAGCGTGT TCACCCTCGA TCAATTGGTG
GGCCGGGGCC TACTTACCGA GGCTGTCGCC GCATACCTGA CGAATGCGGT GCTTGAGGAG
AAGAATATCT TCCTCGCGGG CGGGACCGGC TCAGGGAAGA CTACCCTCGC GAATTCCTTG
CTTGCGGTTA TTCCCGACGA CCAGCGAATG ATCGTGATCG AGACGATCCA CGAGCTCAAT
CTCCGGCAAG AAAACGTCGT CTACTTCGAG GCTGATAGCG AGCAGGGAGT CTCGGTCAGA
CGCCTGATCA AATCCGCCAT GCGCGGCTTT CCAGACCGGA TCATTGTTGG CGAGGTTCGA
GGCGAAGAAG CATACGACCT CATTTATGCC GCCAAGTCGG GGCATCCTGG CACTGTGGCG
ACGCTGCATG CAGACGACGC CCAAAGCATC CTGGAGAAGC TGGAAGACAT GTGCATTGAG
GGCCAGCCCA GCCTGCCGCT CATATCTCAC CGCAAGCGCA TTGCCTCGGC CGCCCACGTC
TTGGGGTTTA TGTCTGAGGT GACTACTGCC AAGGGCAATG AACTTCGATT GTGCGAGCTG
CGCGAAGTGA TTGGCCTCGA TGCCGACGGC AACTACGCCA CCAAACTCAT TTTTGGATAC
GAGCCCGATG CCTAG
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| Protein sequence | MQSQSLALDY LAPVMELLRA ADVTEVMING ADKVFVKRYG SKKHRVDIKI SDQEISSAIT
NLASISFREV GVGNATGHKI ISAQLPGYRI EAWLSPVAVM GSCLTIRKLG SSVFTLDQLV
GRGLLTEAVA AYLTNAVLEE KNIFLAGGTG SGKTTLANSL LAVIPDDQRM IVIETIHELN
LRQENVVYFE ADSEQGVSVR RLIKSAMRGF PDRIIVGEVR GEEAYDLIYA AKSGHPGTVA
TLHADDAQSI LEKLEDMCIE GQPSLPLISH RKRIASAAHV LGFMSEVTTA KGNELRLCEL
REVIGLDADG NYATKLIFGY EPDA
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