Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5367 |
Symbol | |
ID | 4016326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | + |
Start bp | 131249 |
End bp | 132460 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637944989 |
Product | hypothetical protein |
Protein accession | YP_552121 |
Protein GI | 91791171 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.128779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00120871 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAATTC GCTTTCGCAA GTCGATCAAG CTCGCGCCAG GCATCCGCTG GAACATCTCG GGAAGCGGTT CATCCTTCAC GCTGGGCCCT CGAGGATTCT CGCTAGGCGT CGGAACGCGC GGCTCCTATT TGAATACCGG CATCCCCGGA AGCGGCCTGT ACTCGCGTTC CAGGCTCACC TCCGGCAGCC CGAACGCCAG TGCTCGGCCG TCCGACAGCT TCGCCCCTTC GGACCCGGCT GCGTTCACCG GCACAAGCGT CAAGATGACC TGTGGCGTTT CCGACGACGG AACGCTGTAT TTCCAGGACG CATACGGTCA ACCCATGCCG GAGCACTGGG TGGAAAAGGC GAAGAAGCAA AACCGGGAGG CCATACAGAA CCTGATCCGC ACAACCTGCG AGCAGATCAA CTCCCAGGTT GAGGCGCTCG GGTGCCTGCA TCACGAAACC CCGGACCCAA GAGTGAAGCC TAAGTTCGTG GCGCCCCCAT TCGACGTCAA AAAGCCGGTC CGACCCATTC CAGCCGCACC TGGATTCGTG GACAAGGTTC TGGGCAGAGC CAACAAGATC GCGGAGAGCA ATTCCGAGGC GCAGCAGCGA TTCGAGCGCG AGTTGCAAAG CTGGGACGGC AAGTACTCTG AGTACGAGAA AGCCGTAGCT CAGAGTCGCG ATTTCATCGA GCGGGCGATC TACAACGACC CAAAGGCGAT GGAACAGCAC TTATCCAATG CCCTTGAGGA CATCGGTTGG CCGCGGGAAA CTGAAGTGAC TTTCGACATT CGCGACGAGG GCCAAGCCGT AGCCTTGGAT GTGGACCTCC CAGAAGTCGA GCATATGCCC ACCAAGCTCG CAGCGGTGCC GTCGCGTGGC CTGAAGCTGT CTGTCAAGCA GATGTCTGGA GCCAAGGTGC AAGAGCTCTA TTCGGACCAT GTCCACGGCA TCGTTTTTCG CCTCATTGGT GAGGTGTTTG CCGCCCTGCC GACCGTCCAG AGCGTCATCA CTTCCGGCTA CTCCCAGCGG CCCAGCAAGG CTGACGGCCA AATCCGTGAC GAGTACTTGC TGTCGGTACA GATCGAGCGG GCACAGTGGG AAGGCATCAA CTTCAAGGGG CTAGCCCAGG TCGATCCGAG CGAGGCGCTT GCCCAGTTCG ACCTCCGACG CGATATGACC AAGGGCGCTC TGCTCAGGCC GATCCAGCCG CACCTTGCGT GA
|
Protein sequence | MAIRFRKSIK LAPGIRWNIS GSGSSFTLGP RGFSLGVGTR GSYLNTGIPG SGLYSRSRLT SGSPNASARP SDSFAPSDPA AFTGTSVKMT CGVSDDGTLY FQDAYGQPMP EHWVEKAKKQ NREAIQNLIR TTCEQINSQV EALGCLHHET PDPRVKPKFV APPFDVKKPV RPIPAAPGFV DKVLGRANKI AESNSEAQQR FERELQSWDG KYSEYEKAVA QSRDFIERAI YNDPKAMEQH LSNALEDIGW PRETEVTFDI RDEGQAVALD VDLPEVEHMP TKLAAVPSRG LKLSVKQMSG AKVQELYSDH VHGIVFRLIG EVFAALPTVQ SVITSGYSQR PSKADGQIRD EYLLSVQIER AQWEGINFKG LAQVDPSEAL AQFDLRRDMT KGALLRPIQP HLA
|
| |