Gene Bpro_5280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5280 
Symbol 
ID4016239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp32411 
End bp33583 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content61% 
IMG OID637944905 
Producthypothetical protein 
Protein accessionYP_552037 
Protein GI91791087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGCAA CACAAGCAGC GGCAGCGAAA GCGCCACCTG CACCCGCCAA TGTCGTCACC 
GGTGGCGCGA CCCCGGGCTC GTTCAAGCTG CCCGGCTCTG ACACCTCGGT CACTTTTGGC
GGCTACGTTA AAGGGGACGC CATTTTCAGT AGCAAAAGTG CTGGCACGAA CAGCGTGGGC
GATCAGGCAT TGTTCCCGGG CTTGATCCCG CTTACCGGGG ATAACGAGGA AAAACAGCTC
ACGCTCCACG CGCGGCAGTC CCGATTCAAC ATCAAGACCG ACACGCCCAC CGCCATGGGC
GCCCTGTCCA CGTTCCTGGA ATTCGACCTG TTCGGCACGG ATGGCAATGA ATCCGCGAGC
AACTCCCACA ATCTGCGCCT GCGCCACGCC TTCGGCTCAC TCGGCGGCCT GCTGGTCGGG
CAGACCTGGA GCAACTTCAT GGACCCCGGC GCCCTGCCGG AGACGCTTGA CTTCGGCGGC
CCCGTCGGCG AGATGTTTGT CCGGCAGGCG CAAATCCGTT GGACGCAGGC GTTTGCCGGC
GGCAAGTGGT CAGTTTCGCT GGAAAATCCA GAGTCGATCG TGGCGCTACC CAGTGGCGTC
GGCTTCCGCG CCGACGATGA TCGCATTCCT GATATCACCG GAAAAATCGA CTTTAACACC
GCCAAGGGCC GCTATTCGAT CACCGGTATG GCGCGCCAGA TCCGGCTTGA CTCGCCGGCT
GCACCAGCGG CCACCACCCA AAAATGGGGT GGCGTGATCG GCCTCAACGG CGTCATCCCG
ACTACCGGAA AAGACGATTT CCGCTTTTCT GTGAACTACG GCAACGTGAT CGGCCGGTAC
AGTGGGAACG GGACGGCCTT CCGCGACGGG ATTCTCGACG CCAACAGCAA CCTTGATCTG
CCAAATCAAT GGGGAGCGAT TGCCTCGTAT CGTCATTTCT GGACGAGCAA CTTGCGCTCA
ACGGTTGCAC TCTCGGGCTT GGGCGTGAGC AATCCGTCCA CCGCTCACGG CAGCCTCTTC
AAGAACGCTC AGTCGGCGCA CCTGAACCTG ATCTGGAGCC CGGTCGCAAA AACCGATCTG
GGGATTGAAT ACATCCATGC GCGCCGTGAG ATCCAAAGCG GTCAGTCGGG CAATCTGAAT
CGCCTGCAGG CGTCTGCGCA ATACGCGTTC TGA
 
Protein sequence
MAATQAAAAK APPAPANVVT GGATPGSFKL PGSDTSVTFG GYVKGDAIFS SKSAGTNSVG 
DQALFPGLIP LTGDNEEKQL TLHARQSRFN IKTDTPTAMG ALSTFLEFDL FGTDGNESAS
NSHNLRLRHA FGSLGGLLVG QTWSNFMDPG ALPETLDFGG PVGEMFVRQA QIRWTQAFAG
GKWSVSLENP ESIVALPSGV GFRADDDRIP DITGKIDFNT AKGRYSITGM ARQIRLDSPA
APAATTQKWG GVIGLNGVIP TTGKDDFRFS VNYGNVIGRY SGNGTAFRDG ILDANSNLDL
PNQWGAIASY RHFWTSNLRS TVALSGLGVS NPSTAHGSLF KNAQSAHLNL IWSPVAKTDL
GIEYIHARRE IQSGQSGNLN RLQASAQYAF