| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5237 |
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| Symbol | |
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| ID | 4015964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 346138 |
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| End bp | 347589 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637944864 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_551996 |
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| Protein GI | 91791045 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTT CGGACAAGTC AATTATTGAC CCGGAGCCGA ACAATCCTGG TATTCCCATC
AAGAAATCGA CTTTGGGTGT AATCGCTGCA TTGGTCGTGG CTGTTGCGTT CGTCAGCGCG
TTGCTGCTCG ACGCGGGAGC GCCTGCACCG ACATCGGTAG CCCACGCAGA ATCGAAGTCG
ACTGATCCTA CCCAGGACTC CGGTTCGAAA GCTACCATTG ACGAGGAGCT GAAGAAGGCC
AAGCAAGCTG CTGATGAGGA AGATCGCAAA AAGGGTCTAG TGAAGCCTTC TCAAACTGCA
CAGACAGTTG CACAAGGGCC TCAACAGACG GGTGTTCAGC CGTTAGTTAC AGCCGCCGGC
GCGCAGCATA ACTCGCAAAG TCCTCTGCCT CCTGGAGTTC GTCGCGACAA CCAGGATGGA
GCGTTCTACG ACAAGGCCCT GTCTAAGGGG ACCCCCACTG CGGGAACCCA TGGCGGCGCC
GTGACCGGCA ACGGCCGCGG TGGGGAAGAC TTTGAGATTG AGGCTCAAGT TCGTGGTGCA
AAAGCACTTG CCTTTGATGA GTCGCAGGCA TCTTCAGCGA TTGCCCAGGG CGCTCAAGGG
TCAATAGTGC AGACGGGCCT ACCGGCGTCA GGAGTAAATG TAGCCCAGCG ATCGCTCGCC
GCATTGCCAG ATCTGGTCTC CGCAGGAATA ACCCAGGCCC CAAGCGCAAC GGTTCAAACC
TCCATGGACC GTATGCTTGG AAACCTGCGC GGTGCTCAAG GTGGTATTTC AGCCCGGGCC
CAAGGCGGCG GTAGTGGAAA TGCAGCGTGG GTAAATGACT ATGCATCCGG AACTGGTCAA
CGTAGCTCGG AAACGATCAA GTCCTACCCT ACCAGCTCGG CTTACACACT CCATCAAGGC
AAGGTCATTC CAGCTGTACT TGGGCGGCAG ATCAACTCGG ATTTGCCGGG TGAGATTACG
GCCTATGTGG TGACCAACGT CTATGACAGC CTTGGTAATG GAGCCCTGCT GATTCCCAAG
GGTTCAGTAC TGGCTGGTCG CTACAACTCC GAAGTAAAGC CAGGCCAGGA GCGTGTCCTG
TTTGCGTTCA ACCGCTTGAT CATGCCGAAT GGGCAGAGTT TTGACTTGCC AGGTGCTCAG
GGCTCTGATC TTGCTGGAGC TTCGGGTATC TCCGGCGATG TCAACAACCA TTTTTTCAAG
ATGTTCAGTG CGAGCTTCTT TACGGCGTGG TTGGCCGATC GCGTCACGCC ACAGACAACG
ACCAGCGGTG TGGGTGGATC GACTACCTCA GTGTCACCGG CGGGGCAGGT CCTTGTCGAC
GTGAGCAAAG CCATCCTCGA CAGGAACCGC ACAATCCCGC CGACCATCAC TGTCGATCAG
GGTACGCGCA TCAATGTGGA AGTCAAAAAA GACATGGAAT TCTCAGGTCC GTATAGCTGG
AGCAAGAAAT GA
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| Protein sequence | MSISDKSIID PEPNNPGIPI KKSTLGVIAA LVVAVAFVSA LLLDAGAPAP TSVAHAESKS
TDPTQDSGSK ATIDEELKKA KQAADEEDRK KGLVKPSQTA QTVAQGPQQT GVQPLVTAAG
AQHNSQSPLP PGVRRDNQDG AFYDKALSKG TPTAGTHGGA VTGNGRGGED FEIEAQVRGA
KALAFDESQA SSAIAQGAQG SIVQTGLPAS GVNVAQRSLA ALPDLVSAGI TQAPSATVQT
SMDRMLGNLR GAQGGISARA QGGGSGNAAW VNDYASGTGQ RSSETIKSYP TSSAYTLHQG
KVIPAVLGRQ INSDLPGEIT AYVVTNVYDS LGNGALLIPK GSVLAGRYNS EVKPGQERVL
FAFNRLIMPN GQSFDLPGAQ GSDLAGASGI SGDVNNHFFK MFSASFFTAW LADRVTPQTT
TSGVGGSTTS VSPAGQVLVD VSKAILDRNR TIPPTITVDQ GTRINVEVKK DMEFSGPYSW
SKK
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