| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5226 |
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| Symbol | |
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| ID | 4015992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 334590 |
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| End bp | 335588 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637944853 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_551985 |
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| Protein GI | 91791034 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.445343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCG AAGAGCCTCC ATCAGCCGCA AAAGCCCAAG AGGCCATCCG ACTTGGTCAC
ACCCAACGGG TTCTGGCGCA GCTTATGGAT ACGCTGGCCG TTCTGAGAAC CCATTTTGAT
GACGCTGAAA TCAGCGAAAT CATGATCAAT GGGCCAGATG ACGTGTTCAT CGAAAAGCAC
GGCAAAACCA TCAAGCTCAA GGTCAAGCTG GCCGCTCCAA ACATTCGTGC CGCCATTAGC
CTGATCGCCG GCCTGATGGA AAAGGAAGTT GGCGAAAAGA ACAAGCAGCG TGTCTTGTCT
GCGAGACTCC CCGGGTTCCG GGTCGAGGCG ATCCTTCCCC CCGTGGCAGT CAATGGCCCG
ACCATGTGTA TTCGGCGCCA TGCCTCCCGC GTATTCAGCA TCGAAGAGTA CATCAGCAGT
GGTGTGATCT CTCAGGAGTA TGCGGATCTG CTCAAGCAGG CAATCCTCAA CAAGGAAAAC
TTCCTGATCG TTGGTGGAAC TGGCTCGGGC AAGACCACGA TGATGAATAC GGCCTTGAGC
ATGGTTCCGC CTGACGAGCG TCTGTTTGTC ATTGAAACAG TTCACGAACT GCAGATCGTT
TCCCCCAACA AGGTTCTCGT TGAATGTGAC GACGAACAGG GGATGACCCC CCGTAAAGCA
GTGCGCACAG CCATGCGCTA CGCACCCAAA CGCGTGATCG TCGGCGAGCT GCGCGGACCA
GAAGCCTATG ACTGGATGGA TGCGGCAAAC ACAGGCCACC CAGGGTCTGC GGCAACCATC
CATGCCAACA GTGCCGCCCG CGGCCTTGGC CGCCTGGAAA ACCTGCTCCT CATGTCAAAC
ATGGGCGTTC CTCATGAGGC ATTAAAGGTG GCCATCGCGG ACAGCGTTCA GTGGCTGTTT
TTCATCAAAC GCGATGGAGC AACTCGCAAG GTAACCGAGG TGTGCCGTGT ACTCGACTAC
GACCGCGTGA AGGGTGAGTA CGTCCTCGAA AAGTTTTGA
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| Protein sequence | MHIEEPPSAA KAQEAIRLGH TQRVLAQLMD TLAVLRTHFD DAEISEIMIN GPDDVFIEKH
GKTIKLKVKL AAPNIRAAIS LIAGLMEKEV GEKNKQRVLS ARLPGFRVEA ILPPVAVNGP
TMCIRRHASR VFSIEEYISS GVISQEYADL LKQAILNKEN FLIVGGTGSG KTTMMNTALS
MVPPDERLFV IETVHELQIV SPNKVLVECD DEQGMTPRKA VRTAMRYAPK RVIVGELRGP
EAYDWMDAAN TGHPGSAATI HANSAARGLG RLENLLLMSN MGVPHEALKV AIADSVQWLF
FIKRDGATRK VTEVCRVLDY DRVKGEYVLE KF
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