| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5144 |
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| Symbol | |
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| ID | 4016066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | - |
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| Start bp | 254771 |
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| End bp | 255463 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637944777 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_551909 |
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| Protein GI | 91790958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.245646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATGC ATCGAAGCCG TGGCCCCGCA ATTCGTTGGG TTCTGGTCGC CGCGCTGAGT
TACATGCTGC CCACGGTTCA GGCCGCATCG TGCGTGGCTG GAAACCCGCT TCGGGTGGTG
CAATCCATCG ATCTATCTGG CCCACAGCGC TGGGTCGGAG TGGAGTATGC AGAGGGCGCG
CAGTTGCTCC TTCGCCGCGT CACCCGCAAC GGAGGGGTTC ATGGAAAAAC CGTCGACATG
GCGGTGACCG ACGACAAGTT CGATCCTAAG CAGACGGCAG CCAACGTGGG CGCGGCCACA
ATGTCCAGCG TCTGCGCCGT CTTTGGAACC ATGGGCACCG GTCATACAAT GGCGGCCATA
GAAGCAGCTG GAAATGTACC GGTAGTGGCA CCTCTCACCG GAACCGCCGC AGTGCGCAAG
CCTATGGACG GCAAGGCTTT CTTCGTGCGA GGGACATACA ACGACGAGGT TAGGGTTAGG
GCCATTATCC GGCATGCCAA GGCGGTAGGC CTCACCCGAT TCGCCCTGGT CGTACCAAGC
GATAGTTTTG GCTCACCGGT CATCCCTGTA TACCGCGATG CCGTCGAGAA AGAGGGTGGG
AAAGCGTCGC ACTGCTGTCA GTGCCCTCAG TCAACACCAC GGAGTTTGGA CAGGTGGTGG
AGGCACTGTG GGCTGCAAAG CCTGACGTCG TGA
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| Protein sequence | MSMHRSRGPA IRWVLVAALS YMLPTVQAAS CVAGNPLRVV QSIDLSGPQR WVGVEYAEGA
QLLLRRVTRN GGVHGKTVDM AVTDDKFDPK QTAANVGAAT MSSVCAVFGT MGTGHTMAAI
EAAGNVPVVA PLTGTAAVRK PMDGKAFFVR GTYNDEVRVR AIIRHAKAVG LTRFALVVPS
DSFGSPVIPV YRDAVEKEGG KASHCCQCPQ STPRSLDRWW RHCGLQSLTS
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