Gene Bpro_5137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5137 
Symbol 
ID4016059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007949 
Strand
Start bp248117 
End bp248896 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content58% 
IMG OID637944770 
Producthydratase/decarboxylase 
Protein accessionYP_551902 
Protein GI91790951 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.838757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0331511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA TCAACCTGCA ACAAATGGCG AGTCAACTCG ACCATGCGGC GCGCTTTCGC 
ATCGAGATCG ATCCCCTGAC GCCACAGCAT CCCTTCACTC TCGAAGAGGC GTACAGCATC
CAGCGAGAGG CGATCGCGTT GAGGTATGCG CGTGGAGAGC AACCGGTTGG CCTCAAACTG
GGCTTTACCA GTCGGGCCAA AATGATCCAG ATGGGCGTTG AGAGTCTGAT ATGGGGTCGT
CTTACCGATG CCATGCTGTA CGACGAGGGT ACGGAGGTCG ATTTGAGCGA CTTCATCCAT
CCGAGAGCCG AGCCTGAGGT GTGTTTCCTG ACGAAGCGCA GGATTGATCG CCCAATCACT
CTCATCGAGG CCCAATCCTA TCTCGAAGGC GTGGCTCCTG CCATCGAGAT TATCGATTCC
CGCTACCGCG ACTTCAAATT CACGCTGGAG GACGTGGTGG CTGATAACTG CTCTTCAGCA
GGCTTGATCA TTGGTTCGCT CACCAATCGG TTTGACAGCC TCTCCAATCT CGGTGTCTTC
GTGCGTGTCA ATGGCCGCCT GGTTCAAAGC GGAAGTACCG GAGCCATCTT GGGCGATCCC
ATGCGAAGCC TTGTGCAGGC CTCGCAACTG GCTACAAAGG CGGAAATGGT GCTCGAAGCC
GGCTCCCTGA TCATGGCCGG CGCGGCGACT GCCGCTGAGG CCCTGCAGCC TGGAGCGCAT
GTCAGCGCCG AAATCACGGG CCTGGGCCGT GTCGAGTTCC ACACAAGGAG CCAAGCGTGA
 
Protein sequence
MSVINLQQMA SQLDHAARFR IEIDPLTPQH PFTLEEAYSI QREAIALRYA RGEQPVGLKL 
GFTSRAKMIQ MGVESLIWGR LTDAMLYDEG TEVDLSDFIH PRAEPEVCFL TKRRIDRPIT
LIEAQSYLEG VAPAIEIIDS RYRDFKFTLE DVVADNCSSA GLIIGSLTNR FDSLSNLGVF
VRVNGRLVQS GSTGAILGDP MRSLVQASQL ATKAEMVLEA GSLIMAGAAT AAEALQPGAH
VSAEITGLGR VEFHTRSQA