Gene Bpro_5134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5134 
Symbol 
ID4016056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007949 
Strand
Start bp245314 
End bp246105 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID637944767 
Producthydratase/decarboxylase 
Protein accessionYP_551899 
Protein GI91790948 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0285955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGA GGAATGAAAG GGCCGCGGAG CGACTTTGGC AGGCCGCACA AACCGGAACG 
CCATGCGAAC CGGTGCGTGA CCTGATCGGC GCAGACAATA TTGATGCCGC ATATGCAGTA
CAAAAGATCA TCAGCGCAAG TCGAGAAATC CTCGGCGGGC GTCTGGTGGG GCGAAAAATC
GGCCTAACCT CATTGGCAGT ACAGAAGCAA CTCGGCGTCA ACCAACCGGA CTTCGGCATG
CTGTTTGCCG ATATGTGCCT TGGCGACGGC GAAGAAGTGG CCGAGGGCAG GGTGATGCAG
GCTAAGGTCG AGGCTGAAAT TGCCTTGGTT ATCGACCGGC CGTTGACGCA TGAAAAACAT
ACGGTCGCGG ACATCATTCG CGCGACCGCA TTCGCGCTGC CTTCGATCGA GATCGTCGGG
AGCCGCATTG CCAAATGGGA TATCAAACTG GGCGACACCA TCGCAGATAA CGCGTCTAGC
GGCCTTTTTG TGCTGGGTTC CCGGCCGGTC AAGCTTGATG CCTTCGACAT CGTCGGCTGC
GGCATGGTGA TGGAGCGCCG CGGCGACCAA GTCAGCGTTG GCACGGGATC TGCCTGCATG
GGAAATCCCC TGCTGGCTGC GGTATGGCTG GCCGACGTCA TGGCCAGGTA TGGTCAGCCG
CTGCAGCCGG GCGACATCGT CATGACCGGT GCTCTGGGAC CGATGGTGCC CGCAGCTGCC
AGCGACATCT TCGATGCACA TATTCAGGGG CTGGGACGGG TGCGAGCTTC CTTTGCGCCG
GCACAGAACT AA
 
Protein sequence
MQERNERAAE RLWQAAQTGT PCEPVRDLIG ADNIDAAYAV QKIISASREI LGGRLVGRKI 
GLTSLAVQKQ LGVNQPDFGM LFADMCLGDG EEVAEGRVMQ AKVEAEIALV IDRPLTHEKH
TVADIIRATA FALPSIEIVG SRIAKWDIKL GDTIADNASS GLFVLGSRPV KLDAFDIVGC
GMVMERRGDQ VSVGTGSACM GNPLLAAVWL ADVMARYGQP LQPGDIVMTG ALGPMVPAAA
SDIFDAHIQG LGRVRASFAP AQN