Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5134 |
Symbol | |
ID | 4016056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 245314 |
End bp | 246105 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637944767 |
Product | hydratase/decarboxylase |
Protein accession | YP_551899 |
Protein GI | 91790948 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0285955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGAGA GGAATGAAAG GGCCGCGGAG CGACTTTGGC AGGCCGCACA AACCGGAACG CCATGCGAAC CGGTGCGTGA CCTGATCGGC GCAGACAATA TTGATGCCGC ATATGCAGTA CAAAAGATCA TCAGCGCAAG TCGAGAAATC CTCGGCGGGC GTCTGGTGGG GCGAAAAATC GGCCTAACCT CATTGGCAGT ACAGAAGCAA CTCGGCGTCA ACCAACCGGA CTTCGGCATG CTGTTTGCCG ATATGTGCCT TGGCGACGGC GAAGAAGTGG CCGAGGGCAG GGTGATGCAG GCTAAGGTCG AGGCTGAAAT TGCCTTGGTT ATCGACCGGC CGTTGACGCA TGAAAAACAT ACGGTCGCGG ACATCATTCG CGCGACCGCA TTCGCGCTGC CTTCGATCGA GATCGTCGGG AGCCGCATTG CCAAATGGGA TATCAAACTG GGCGACACCA TCGCAGATAA CGCGTCTAGC GGCCTTTTTG TGCTGGGTTC CCGGCCGGTC AAGCTTGATG CCTTCGACAT CGTCGGCTGC GGCATGGTGA TGGAGCGCCG CGGCGACCAA GTCAGCGTTG GCACGGGATC TGCCTGCATG GGAAATCCCC TGCTGGCTGC GGTATGGCTG GCCGACGTCA TGGCCAGGTA TGGTCAGCCG CTGCAGCCGG GCGACATCGT CATGACCGGT GCTCTGGGAC CGATGGTGCC CGCAGCTGCC AGCGACATCT TCGATGCACA TATTCAGGGG CTGGGACGGG TGCGAGCTTC CTTTGCGCCG GCACAGAACT AA
|
Protein sequence | MQERNERAAE RLWQAAQTGT PCEPVRDLIG ADNIDAAYAV QKIISASREI LGGRLVGRKI GLTSLAVQKQ LGVNQPDFGM LFADMCLGDG EEVAEGRVMQ AKVEAEIALV IDRPLTHEKH TVADIIRATA FALPSIEIVG SRIAKWDIKL GDTIADNASS GLFVLGSRPV KLDAFDIVGC GMVMERRGDQ VSVGTGSACM GNPLLAAVWL ADVMARYGQP LQPGDIVMTG ALGPMVPAAA SDIFDAHIQG LGRVRASFAP AQN
|
| |