| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5131 |
|---|
| Symbol | |
|---|
| ID | 4016053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 242445 |
|---|
| End bp | 243155 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637944764 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_551896 |
|---|
| Protein GI | 91790945 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.138859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0107113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAA TTCTGGAAGT CGCGGGAATG GAAAGCGGGT ATGGGACTTG TCGGGTTCTG
TTCGGCATTG ATCTCAAGAT CAACGACGGC GAAGTTTCCA CCCTGCTGGG GCGCAATGGC
ATGGGCAAGA CTACCAGTGT GCGGTCAATC CTGGGCCTGA CACCGGTACG CACTGGGACC
GTCCGTTTCC GCGGAGAGCA GATCCACCGC CTGTCACCCA ATGCCATCGG TTCAAAAGGC
ATCGCAGTGG TGCCCGAAGG TCGGCAGATT TTCCCTAACC TGACTGTGAA GGAAAACCTG
GTCGCGTTTG CCGCGAACCG AAACGGAACG CGTGAGCCCT GGACGCTCGA GAAGATTTAT
GCGTTCTTTC CACGCCTCCA GGAACGCGAG CGGAATATGG GCGTCGAGCT TTCCGGTGGC
GAGCAGCAGA TGCTAGCAAT CGGTCGGGCG TTGATGACCA ATCCGCATCT GCTGATCCTC
GATGAGGCGA CTGAGGGGCT GGCCCCGCTG ATACGCGAGG AGATCTGGCA ATGCCTGGCG
ACTTTGCGCC GAAGCGGACA AACCATTCTT GTCATCGATA AGTATGTCGA GCGCCTGATT
GCTCTGGCCG ATCGGCACAC CATCATCGAG CGCGGCAAGG TGGCATGGGA AGGAACGTCC
GCAGAGCTCG GCGCTGACAA AACCATCTGG GAACGGTACC TGGGCGTCTG A
|
|---|
| Protein sequence | MSAILEVAGM ESGYGTCRVL FGIDLKINDG EVSTLLGRNG MGKTTSVRSI LGLTPVRTGT
VRFRGEQIHR LSPNAIGSKG IAVVPEGRQI FPNLTVKENL VAFAANRNGT REPWTLEKIY
AFFPRLQERE RNMGVELSGG EQQMLAIGRA LMTNPHLLIL DEATEGLAPL IREEIWQCLA
TLRRSGQTIL VIDKYVERLI ALADRHTIIE RGKVAWEGTS AELGADKTIW ERYLGV
|
|---|
| |