Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5130 |
Symbol | |
ID | 4016091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 241696 |
End bp | 242448 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637944763 |
Product | ABC transporter related |
Protein accession | YP_551895 |
Protein GI | 91790944 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0104997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAAAC CACTTCTGGA AGTACGGAAT CTTGTCAAAA GATTCGGAGG CCTGGTGGTG ACAAACTCCG CCAGCTTGAC GGTGGTGGAG GGTGAGATGC ATGCATTGAT CGGGCCGAAC GGCGCCGGCA AGACAACGCT GATTCATCAA ATTTCAGGTG GTTTGGCGGC GGACGACGGC GAGATGCTGT TTTGCGGCGA AGACATTTTC CGGATGCCGA TGCACCAACG AGTCAGACTT GGTCTTGCGC GCTCCTACCA GGTCACCAGT ATCTTCATGA GGCTCACGGT GCTGGACAAC GTCGCGCTGG CGGTACAGGC CCACAGCGGC TCCAGCTTCC GTTTCTGGCG CGCGGCGGTG TCTGAAACCG CACTGTTCGA AGAAGCCTAC TCCATCCTGG AGCAAGTTGG TCTCCACACC AAGGCCGGTC TGCTGGCTGG AAGTCTGGCG CACGGTGAGC AGCGGCAACT CGAGCTGGGC ATCACCCTCG CGACCCGTCC AAAGTTGTTG TTGCTCGATG AGCCTATGGC CGGTATGGGC CCCGAAGATT CCGAACGCAT GGTTAATCTC CTGCTCACCC TGAGGGGCAA AGCGACGGTG TTGCTGGTCG AGCACGATAT GAGCGCGGTC TTCCGTTTGG CGGACACGAT CTCCGCGCTG GTTTATGGAC GCGTGATTGC GAGCGGTACA CCGGCAGAGA TAAAGGGCGA CCCGGAAGTC AAGAAGGCCT ATTTGGGGGA GGAAGTGGCA TGA
|
Protein sequence | MTKPLLEVRN LVKRFGGLVV TNSASLTVVE GEMHALIGPN GAGKTTLIHQ ISGGLAADDG EMLFCGEDIF RMPMHQRVRL GLARSYQVTS IFMRLTVLDN VALAVQAHSG SSFRFWRAAV SETALFEEAY SILEQVGLHT KAGLLAGSLA HGEQRQLELG ITLATRPKLL LLDEPMAGMG PEDSERMVNL LLTLRGKATV LLVEHDMSAV FRLADTISAL VYGRVIASGT PAEIKGDPEV KKAYLGEEVA
|
| |