| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4926 |
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| Symbol | |
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| ID | 4015878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | - |
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| Start bp | 20821 |
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| End bp | 22104 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637944566 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_551698 |
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| Protein GI | 91790747 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTTCG CTCAGGGTGG GCTGGCGGGC GGTTTGAGCC TGACGGCTGC ACTCGATGCG
GCGCGTGCCT ACGACCCCAA ATACCAGTCC GCCTTGCGGG ACTTTGAAGC CAGCAGGGAA
TATGGTGTTT ACGGGAGAGC TGCGCTCGGC CCCGAGGTGT CGCTGGGGGC GTCGCTGGCG
CAGAACCAGC TGGACCAGTC AGTGGGCACG GCGTCACGCA CGACGAGCTA CCAAAGCAGT
AACTTGCTGC TACAGCTGCG ACAACCGTTG TACAACGCGG AGTTGCGGGC ACGCGGTCGC
GAGGGGGAGG CCCGCTCTCG ACAGGGCGAA GCGGCGCTGG CCGATCAAAC CAGCCAGTTG
ATGGTGCGCC TGCTGGAGGC CTACACAAAC GTTCCGCTGG CCGACGAGCT GCTGGCCACG
GCAACGGCCG AGGTTGCTGC CCTGGGCGAA CAATTGCGCA GCGCTCAAAA CATGCGTGCG
CGGGGCGAAG GTACGGTGAC CGATGAGTTG GAGGCTCGCT CACGGCTGGC GGTGGCCGAG
GCCCGACTGC TCGAGGCTCG TGACGTCCGC GAGGATGCAA TCGGTCGCCT GGTCATGATG
CTGGGCCCGA CCGTTCGTCC GGAGCCCCGC AAGTTGGACG CGATGTTCAC CCGTCTGCCG
CTGCAGCCCG CCGACCTGGC AGCCTGGGAG CTTCTGGCTC TGGCGCGCAA CCCGACCATT
GAGGTGCGCC GCCACGCCCT ACAGGCCGCG CGTGAGGTGC TGGACCGCAG TGACGCGGTA
TGGCGGCCGC GGCTGGATGC GGTAGCCAGC GTGTCCCGGG CGGACTCGGA CTCGATCAAC
ACGGTCAATC AATCCAGTTT TCAGCGCTCC GTTGGGGTGC AACTCAACAT GCCGGTGTTT
GACAATGGGC GTAACGCGTC GCAAGCCCGG CAGGCGGCGG CGGCCATGGG TTCGGCTCAA
GCCATGCTGG ACGACGCCCG TGAAACCGTG CTCACTGAGT TGCGCAAGCA GTACCGAGTC
CTGCTCAGCC AGGCGCAGAA AGTCAGCGCC TACTCCGAGG CACTTGACGC CGCCACCCTG
CAGGTCCAGG CCACGCGACA GAGCGTGAAG GGGGGCATTC GTGTGACGCT CGACGTGCTG
AATGCGCAGA CGCAGCGGTT CACAGTGCAG CAGGAGCTGA CGCAGGCGCG CTTCAATTAC
TTCAAGGCCT GGTTCCGCTT GCGCGCCGCC GCCGGCGTGC TGGACGTGTC GGACCTGCTG
CTGATTGACC AGCAACTGAA ATGA
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| Protein sequence | MCFAQGGLAG GLSLTAALDA ARAYDPKYQS ALRDFEASRE YGVYGRAALG PEVSLGASLA
QNQLDQSVGT ASRTTSYQSS NLLLQLRQPL YNAELRARGR EGEARSRQGE AALADQTSQL
MVRLLEAYTN VPLADELLAT ATAEVAALGE QLRSAQNMRA RGEGTVTDEL EARSRLAVAE
ARLLEARDVR EDAIGRLVMM LGPTVRPEPR KLDAMFTRLP LQPADLAAWE LLALARNPTI
EVRRHALQAA REVLDRSDAV WRPRLDAVAS VSRADSDSIN TVNQSSFQRS VGVQLNMPVF
DNGRNASQAR QAAAAMGSAQ AMLDDARETV LTELRKQYRV LLSQAQKVSA YSEALDAATL
QVQATRQSVK GGIRVTLDVL NAQTQRFTVQ QELTQARFNY FKAWFRLRAA AGVLDVSDLL
LIDQQLK
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