Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4895 |
Symbol | |
ID | 4012430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 5185140 |
End bp | 5185916 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637944537 |
Product | short chain dehydrogenase |
Protein accession | YP_551669 |
Protein GI | 91790717 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000739396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAC TCGTGTTCAT CACCGGCGCC TCTAGCGGCA TTGGCCAGGC GCTGGCCCTG CGGTTTTACG CGGCGGGCGA CCGGCTGGCA CTCGCTGCCC GCCGCACCGC AGAGGTCCAG TCTTGGGCGG AGGCAAACAC ACTGCATGCT GGCCGCTATC AGATTTATAG TGCCGACGTG TCCTCCATCG ACAGCATTGT GGCGGCCGGG ACAGCCTGCA TGGCGGCGCA GGGCGTGCCC GATGTGGTGA TCGCGAATGC CGGTATCAGC ATCGGCATGG ACACCACCGA GCGAGCAGAT CTGGACGTCA TGGCGCAGAC CTTTGCTACC AACAACATCG GCATGGCCGC CACCTTTCAT CCCTTTGTTG CGGCCATGGT GGCGCGCGGT ACCGGTGCGC TGGTGGGCAT TGCCAGCGTA TCCGGCATAC GCGGCCTGCC GGGCCACGGC GCCTACTGCG CCAGCAAGGC GGCCGTCATT GGCTACTGCG AAAGCCTGCG CGGCGAACTC CGGCCCAGCG GCGTCAAGGT GGTGACGATC TCCCCGGGCT ATATCGACAC ACCGTTGACA CGGCAAAACC GCTATGGCAT GCCCTTCCTG ATGAAGGCGG AGGTGTTTGC CGACAAGGCC TTCACCGCCA TCCAGGCCGG CCGCAGTTAC TGCGTGATTC CGTGGCAAAT GGGTGTGGTG GCCAAGTTGT TGCGCTTGCT GCCCAATGCC GTGTTTGACA GGGCCCTGGC CGGCCGGCCC CGCAAGCACC GGCAGAGCCT GGGCTGA
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Protein sequence | MSRLVFITGA SSGIGQALAL RFYAAGDRLA LAARRTAEVQ SWAEANTLHA GRYQIYSADV SSIDSIVAAG TACMAAQGVP DVVIANAGIS IGMDTTERAD LDVMAQTFAT NNIGMAATFH PFVAAMVARG TGALVGIASV SGIRGLPGHG AYCASKAAVI GYCESLRGEL RPSGVKVVTI SPGYIDTPLT RQNRYGMPFL MKAEVFADKA FTAIQAGRSY CVIPWQMGVV AKLLRLLPNA VFDRALAGRP RKHRQSLG
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