Gene Bpro_4818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4818 
Symbol 
ID4012508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5099769 
End bp5100146 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content70% 
IMG OID637944461 
Productendoribonuclease L-PSP 
Protein accessionYP_551593 
Protein GI91790641 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA TTTCCTGCGG CGAGGTGCCG GCGCCCGGCG GCCACTATTC ACATGCGGTG 
GAAGCCGGCG GCCTGGTGTT TGTCTCGGGC ATGCTGCCGT CCGGCAACAA CCAGCCGCCC
GCGCCCTTCG AAGCCCAGGT GCAGTCGGCG CTGGACCACT GCAGCGCCGT GCTGGCTGCG
GCGGGCTGCG GGTTCGATGA TGTGGTGCAG GCCACGGTGT ACCTGGTGGG CGTGGAGCAC
TGGCCGGCGT TCAACCAGTT GTATGCCGAG CGCTTCGGCA GCCACCGCCC GGCGCGGGCC
GTGGTGCCGG TGCCGGCGCT GCACCACGGT TTCCTGGTCG AGATCCAGAT GGTGGCCGAG
CGGCCAGGCC GGGCCTGA
 
Protein sequence
MKLISCGEVP APGGHYSHAV EAGGLVFVSG MLPSGNNQPP APFEAQVQSA LDHCSAVLAA 
AGCGFDDVVQ ATVYLVGVEH WPAFNQLYAE RFGSHRPARA VVPVPALHHG FLVEIQMVAE
RPGRA