Gene Bpro_4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4817 
Symbol 
ID4012507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5098585 
End bp5099727 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content68% 
IMG OID637944460 
Productalanine racemase-like 
Protein accessionYP_551592 
Protein GI91790640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA GCCCCTTTGA GCCTCTCGAA ACCCCCGCGC TGCTGCTGGA CACAGCGCGC 
ATGGACCGCA ACATCGAACG CATGCGCGGG CGCATGACGC GCCACGGCGT TCACTTCCGC
CCGCACGTCA AGACCAACAA GTGCATGGAC GTGACGCAGC GCCTGCTTGA CGCCGGCGCC
CGCGGCATCA CGGTCTCCAC CCTGCGCGAG GCCGAGTATT TCAGCGAGCG CGGCATCACC
GACATCCTGT ATGCGGTGTG CCTGTCGCCC AACAAGCTGG CGCATGCGCT GCGCCTGCGC
CGGCAGGGCA TCCGGCTGAC GGTGATCGTG GACAGCGTGG AGATGGCGCT GCAGCTCAAC
CCGGAAAGGA TTCAGGGAGA CGACCGGCTG GATGTGCTAA TCGAGATCGA CTGCGACGGA
CACCGCTCCG GGGTTCAGCC CGACTCGCCC GCGCTGCTGG CCATTGCCCA AGCGCTGCAG
TCACAGGGAC TGGCGGTGGG CGGCGTGATG ACCCACGCAG GCGACTCCTA CATCTGCCGC
AGCACCGAGG CCATCGTGGC CATGGCCGAG CAGGAGCGCG CCGGCGCCGT GCAGGCGGCG
AGGCGCCTGC GCGCGGCCGG CCATGCCTGC CCGGTGGTCA GCGTGGGCTC CACGCCGACC
GCGCTGTTTG CCGAGAACCT TGATGGCGTG ACCGAGGTGC GCGCCGGCGT GTTTGTCTTT
TTTGACCTCG TGATGGCCGG CCTCGGCGTT TGCCGCACCG ACGAGATTGC GCTGTCGGTG
CTGACCACTG TGATCGGCCA CCAGAAGGAC AAGGGCTGGA CGGTGACCGA CGCGGGCTGG
ATGGCCATGT CGCGCGACCG GGGCACATCG CGGCAAAGCC TTGACCAGGG CTACGGCGTG
GTCTGCGGTG TCGATGGCGC TCCGCTGGAA GACCTGATCA TGGTCGATGC CAACCAGGAA
CACGGCATCA TCGCCCGCCG GCCGGGCAGC ACGGCGGGCC CGTCACCCTT CCTGCCGATT
GGCAGCCAGC TCCGCATCCT GCCCAACCAT GCCTGCGCCA CGGCGGCACA GTTCCCCTGT
TATCAGGCGC TGGACGGGGA GCAGCGGCTC GCCGGCACCT GGCAACGCTT TTACGGCTGG
TAG
 
Protein sequence
MNTSPFEPLE TPALLLDTAR MDRNIERMRG RMTRHGVHFR PHVKTNKCMD VTQRLLDAGA 
RGITVSTLRE AEYFSERGIT DILYAVCLSP NKLAHALRLR RQGIRLTVIV DSVEMALQLN
PERIQGDDRL DVLIEIDCDG HRSGVQPDSP ALLAIAQALQ SQGLAVGGVM THAGDSYICR
STEAIVAMAE QERAGAVQAA RRLRAAGHAC PVVSVGSTPT ALFAENLDGV TEVRAGVFVF
FDLVMAGLGV CRTDEIALSV LTTVIGHQKD KGWTVTDAGW MAMSRDRGTS RQSLDQGYGV
VCGVDGAPLE DLIMVDANQE HGIIARRPGS TAGPSPFLPI GSQLRILPNH ACATAAQFPC
YQALDGEQRL AGTWQRFYGW