| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4673 |
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| Symbol | |
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| ID | 4012636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4961213 |
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| End bp | 4962895 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637944322 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_551454 |
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| Protein GI | 91790502 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTT CACGTTTCCA TGCCTTCGGG GTTCTTTGTC TTGCGTGGGC CTGGCTGGCG
TATGACCATT ACCGTCCCTG GGTGAACTTT CATTCAGAGG CGCTGGCGCT GCTAGGCATA
GGCTTGCTGG TGGCCAGCCG CTGCCTGGTT CGCAGTTGCC TGGACGCCGA AGCAGCGCCT
CGCATAGTTT GGTGGGTAAT GGCCGCAGGG CTCCTGCCAT GGCTTCAATA TGCAATGGGC
ATCAGCTTGT TTGCAGGGGA TGCGCTTCTC GCATCGCTGT ACCTCAGCGG TCTCGGCGCA
GCTATTTGGC TCGGTTACAG CTATGTAGTG GCTCCGCCTG AAAAGGATGC AGCATTAACC
TCAGTGTTTT ATATGCTCTG GTTTGCCGCC CTGGTATCGG CGGCAATAGG CTTGCTGCAG
TGGCTGAATT TGCAGGGTCC TCTGGCCATG TACGTGGTGC AAACCGACGC CGGTGACCGT
GCCATGGGCA ACTTGGGCCA GCCTAATCAA TTGGCGACTT TGCTGCTGAT GGGCATGGCT
GCCTTGGCAT GGACTTTTGA GCGCAAGCGC ATCGGGCGTT TGGGGCTGAT CGTTGGCATC
GCTTTTATGT CGGTGGCTCT GGTCCTTGCC CAGTCGCGCG CGGGAATGTT GAGCGCGCTT
GTGGGGGCAA TTTTTCTGAT CTGGAAGAAC AACGCAGCGC CAGAACGGAT AGCGCCAAGG
TATGTGTTTG CCTGGCTGCT GGCGTATGGC GCTGCGGTGC AAATGCTTCC ATATTTCCAG
GATTTTCTGC TGATGGGAGG CGGTCGCAGT ATGAATCTGG GGGTTGATAG CGCGCGTGTC
ACTATTTGGA AGCAGATGCT TAGCGGCATA GGCCAGTCTC CATGGCTGGG CTATGGATGG
AACCAGACTC CCACCGCCCA CGCAGCTGGC AGTTTGGCGG TACCCGGTTC CATGACATAT
ACCAATGCAC ACAACATCGT GCTGGATATT CTGGCATGGA ATGGGGTGCC GCTGGGCTTG
GTGTTGACTG CGGCATGCGC CTACTGGTTT GTGTCGCGCA TGCACGGTGC AATGCGGTCC
AGTGCGATTT ACGCAATGGC TTGCTTGTTG CCTATTGCTG TACACAGCAT GGTGGAATAT
CCGTTTGCCT ATTCTTACTT TCTGCTCACC GCGGGGCTGA TGGTGGGCAT AGTCGAGGCA
TCCCATCGCG GGATTCATAC CATCAGGCTC AACCTGCGTT GGGTTGGTTG TGCATTGGCT
GTCTGGTTTG TGCTTGGCAG TTACATGGTT TATGAATACC TATTAATCGA GGAAGACTTT
CGCGTAGTCC GTTTCGAAAA TTTGCGCATA GGTCAGACTC CGGCGGAATA CAAGGTGCCA
GATGTCTGGG TTTTTTCGCA TATGGCGTCC ATGCTAAAGG CGGGACGCCA GCAGGCGCTG
CCCGGCATGA AACCGGACGA TCTGGAGAAT CTTCGCAAGG CATCGTTGCG CTTTCCCTAT
GGTAGCCTTG GCTTGCGTTA TGCCCTGGCA TTAGGGCTCA ACGGGGATCC GGCGGGTGCG
ACTCGCCAGA TGGCGGTTGT TCGTGGCATG TACGGTGAAT ATTATTACCA GGCCGCAGTG
AGCGTATTGC GAGCGGTACA GCAAGAAAAA TATCCGGAAC TTTCCAAGGT AGTGACACCC
TGA
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| Protein sequence | MTASRFHAFG VLCLAWAWLA YDHYRPWVNF HSEALALLGI GLLVASRCLV RSCLDAEAAP
RIVWWVMAAG LLPWLQYAMG ISLFAGDALL ASLYLSGLGA AIWLGYSYVV APPEKDAALT
SVFYMLWFAA LVSAAIGLLQ WLNLQGPLAM YVVQTDAGDR AMGNLGQPNQ LATLLLMGMA
ALAWTFERKR IGRLGLIVGI AFMSVALVLA QSRAGMLSAL VGAIFLIWKN NAAPERIAPR
YVFAWLLAYG AAVQMLPYFQ DFLLMGGGRS MNLGVDSARV TIWKQMLSGI GQSPWLGYGW
NQTPTAHAAG SLAVPGSMTY TNAHNIVLDI LAWNGVPLGL VLTAACAYWF VSRMHGAMRS
SAIYAMACLL PIAVHSMVEY PFAYSYFLLT AGLMVGIVEA SHRGIHTIRL NLRWVGCALA
VWFVLGSYMV YEYLLIEEDF RVVRFENLRI GQTPAEYKVP DVWVFSHMAS MLKAGRQQAL
PGMKPDDLEN LRKASLRFPY GSLGLRYALA LGLNGDPAGA TRQMAVVRGM YGEYYYQAAV
SVLRAVQQEK YPELSKVVTP
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