| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4548 |
|---|
| Symbol | |
|---|
| ID | 4012784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4810990 |
|---|
| End bp | 4812048 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637944199 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_551331 |
|---|
| Protein GI | 91790379 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAG ACCAGCTCTC CCCGCTTGTG GCCGACCTTC ACCTCCTGAC GGTCCTAGCG
GCCACCCGCA GCTTCACCGA GGCGGCACGC CGCCTGGGCG TCTCCAAGGC CTCGGCCAGC
ACGCGCATCA GCGAGCTGGA GCGCGCCGCC GGCGTTTCGC TGGTACGCCG GACCACGCGC
TCCGTCGGCC TGACCGAGGC GGGCCAGCAG CTGGTCAATG AGATGCAGCC GGCATTCAAC
CGGATCAGCG AGAGCTACAC CGCGGTCCGG GACCTCGTCG GCACGCCGCG CGGCCTGATC
CGGGTCACCG CGCCGGTGGC ACTGGGCCGC CAGCACCTGG CACCCTGCGT AGCCGCCTTC
CTGAAGCGCT TTCCCGATAT CCACATCGAG CTGGAACTGA CCGACCGCTT CGTCAACCTG
GCCAACGAAG GCTTTGACCT GGCCATCCGG CACACCAACA CGCCGCCCGA GACGCATGTG
GCCTGGGTGC TGTGCGAAAC CCGTTCCTTC CTGCTCGCCA GCCCCGACTA CCTGCAGCGC
CGGGGCACGC CGTCGCACCC GTCCGAGCTG ACCTCGCACG ACTGCCTGCT GTACCTGGGC
GGCAGCCATG CCGGCAGCTG GACGTTTGTG CGCAACAGCA AACGCAAATC GGGCGAACGG
GTGGGCGTGA CCATCACCGG CACGCTCAAG GCGAACAACA GTGAAGTGCT GCGGGACGCC
CTGCTGGCAG GCCTGGGCAT AGGCCTGCTG CCCGACTTCA GCCTGCCGGA AGGATGTGCC
CCCACGCTTT TCACTTCGTG TAATACGCTG CCCCCCGAGG GGGCTGCGCT TGCTCGGGGC
GGCCCAGCGC GGCGCGCGGC CCGCGAAAAA CACCCACCGC TGGTGCAGGT GCTGCCTGAC
TGGCAGGCGC AGGGATTCTT TGGCGAACGC ATTTATGCCC TGCGGCCCTG GTCGCCGCAG
GTGCCGAAGG CCGTCCAGTG CTTTGTCGAA CACCTGCGCC AGAGTTTTGC CCAGGGGTTT
GCCGGCGTGG CGGGTGGCCA GCCTCCGGCC AGAAGCTGA
|
|---|
| Protein sequence | MSSDQLSPLV ADLHLLTVLA ATRSFTEAAR RLGVSKASAS TRISELERAA GVSLVRRTTR
SVGLTEAGQQ LVNEMQPAFN RISESYTAVR DLVGTPRGLI RVTAPVALGR QHLAPCVAAF
LKRFPDIHIE LELTDRFVNL ANEGFDLAIR HTNTPPETHV AWVLCETRSF LLASPDYLQR
RGTPSHPSEL TSHDCLLYLG GSHAGSWTFV RNSKRKSGER VGVTITGTLK ANNSEVLRDA
LLAGLGIGLL PDFSLPEGCA PTLFTSCNTL PPEGAALARG GPARRAAREK HPPLVQVLPD
WQAQGFFGER IYALRPWSPQ VPKAVQCFVE HLRQSFAQGF AGVAGGQPPA RS
|
|---|
| |