| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4407 |
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| Symbol | |
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| ID | 4012900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4652035 |
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| End bp | 4653660 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637944055 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_551192 |
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| Protein GI | 91790240 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.095613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTC GTGATTTCGT CAAAGGCGCA GCAGCTCTTA CTGCAACCGC CGCCGCCGGC
ATCGGGCAAG CGCAACAAGC CGGGGCGCCA GTTGCGAAGC GCTCAATTCT GACAGCTACC
GCGCAGTTCG ACCCGGCCCG CCCGGAGATT GCCCGGGTCG TCGCACAGTC CTGCAAGTCG
CTCGGGTGGG AGGTTGAAGC CAATCCCATC GACTACAACC AGGGCATCAC GAAAGTGATC
AACGAGCATG ACTTCGAGAT GTTCCTGGTC TTTCTTCCGG GTACGGCCAT CCGCATCGAC
CCCGACTTCT TCATTCGCAG CGTTCACCAC TCCACAGAGC ATAAGCGCGG CGGCTTCAAC
TGGGCGGGCT ACAAGAACGA TCGGGTGGAT GCTCTTGCGG CCGTGCAGAG CCGCATGATG
AACTTCAACG ATCGCTGGAA GCCAGTCTTC GAAGCGCAGG ACGTCATCTT CCAGGACCAG
CCTGGAACCG TGCTGGCCTA TACGCAGATG ACGATGGCTC ATCGTTCGGA CAAGCTCAAG
GGCCTGGTGC CGCAGCTCGG CGAGGGCATC GGCGGCTTTT GGTCTGACGT CAACATGGAA
GTAGCGGGCG ATGGCTACTC GCGTACGGGC TCAAACGCGG ATGTGAAGCA TCTGAATCCG
CTCGCCGTTA CCGACACGAG TGAGTTCATG GAGCTTTCCA TGATCTATGA CCGACTCTTT
CGCCTCGGAC CGGATGGCAA ACCTGTACCG TGGGCAGCCT CCGGAATGAA GTTGATCAAC
GACAGAACGA TCGAGCTGAC GATCCGCTCG GATATGCGCT GGCATGACGG CAAGCCAGTG
ACGGCCGAGG ACGTCATGTT CACCTTCGAC TATCACAAGA AGTGGAAGGC GCCATTTTTC
CTTGCCGCGC TCAATAATGT CGTCGCGGTG GAGCTCCCGA GCCCCAATAC GGTGCGCATC
CGACTCGAAA ATCCATCGGC TCCCTTTGTC TCCAACGTGA TGGCGACGAT GTTTCTTCTC
CCCAAACACA TTTGGGAAGG CATCCCGGAG AAGGTCGGCA TTGACGATCC GCTCAAATTC
CCCAACGACA AGCCGGTCGG TAGCGGACCG TTCAAGTTCG ACTACTGGCG GCGTGGCTCG
GAACTCAAGG TCACCGCGTT CCGCGAGCAC TTTAAACCGC CCAAGTGCGC TGGCATCATC
CGCGTCGTCT ATGGCAGCCA TGACGCTTTG GCCGCTGCCA TCGAGAAGGG GGAATGCGAC
CGCTCACGCT ATATCGTGTC GCCAGCCCTC GTCAATCGCC TGAAAGCGGT GAAGAACGTA
GTAGCCAAGG GCTATCCCAG CCACGGCCTC TATCACCTGG CGTACAACAA CAAGATCAAG
CCTTTCGACG ATCCCGTCTT TCGCCAGGCG CTCAACCATG TGATGCCGCG CAAGATGATC
TCGGAACTGA TCCTGCTTGG ATACGCTGAT CCTGGTGCAT CAATCATCTC GCCCATCAAC
GCGTTCTGGC ACAACCCGGC TGTCAAGGTT CCGGCCGAAG ACGTGAAGAA GGCGCGCGAC
ATTCTTGCGA AGGCCGGTTA CGGATGGGAC GCGCAAGGCA AATTGCTCTC TCCCCGCGGC
AAATGA
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| Protein sequence | MDRRDFVKGA AALTATAAAG IGQAQQAGAP VAKRSILTAT AQFDPARPEI ARVVAQSCKS
LGWEVEANPI DYNQGITKVI NEHDFEMFLV FLPGTAIRID PDFFIRSVHH STEHKRGGFN
WAGYKNDRVD ALAAVQSRMM NFNDRWKPVF EAQDVIFQDQ PGTVLAYTQM TMAHRSDKLK
GLVPQLGEGI GGFWSDVNME VAGDGYSRTG SNADVKHLNP LAVTDTSEFM ELSMIYDRLF
RLGPDGKPVP WAASGMKLIN DRTIELTIRS DMRWHDGKPV TAEDVMFTFD YHKKWKAPFF
LAALNNVVAV ELPSPNTVRI RLENPSAPFV SNVMATMFLL PKHIWEGIPE KVGIDDPLKF
PNDKPVGSGP FKFDYWRRGS ELKVTAFREH FKPPKCAGII RVVYGSHDAL AAAIEKGECD
RSRYIVSPAL VNRLKAVKNV VAKGYPSHGL YHLAYNNKIK PFDDPVFRQA LNHVMPRKMI
SELILLGYAD PGASIISPIN AFWHNPAVKV PAEDVKKARD ILAKAGYGWD AQGKLLSPRG
K
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