Gene Bpro_4238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4238 
Symbol 
ID4013079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4465563 
End bp4466207 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content56% 
IMG OID637943890 
ProductDJ-1/PfpI family protein 
Protein accessionYP_551028 
Protein GI91790076 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATAG CCATCCTGAC ATTCGACGGG TTCAACGAGC TGGACTCATT GATTGCCTAT 
GGAATGCTGA GCCGCATTTC ATTATTGGGT GATGCCGACT GGAAGGTAAG CATTTCCAGT
CCGACTGCGC GGGTGACATC GATGAACGGG TTAACCATCG ATGCTCACAT TGGCCTGAAA
GAAGCCAACC AGGCCGATGC CGTATTAATA GGCAGCGGCA TGAAAACGCG TGAAGTCGCC
AACGACCCGT CCATCCTCGG TCAGCTGCAG CTCAACCCGC AAAGGCAACT CATCGCAGCG
CAGTGTTCCG GAACATTTTT GCTCGCAAAG CTGGGCCTCA TCGGCCAAAC CCCGGCGTGC
ACAGACTCAA GCAGCAAGCC CTGGGTACAA GCTGCCGGGG TCAAGATTTT GAACCAGGCT
TTTTTTGCGG ATGGCAACCT GGCAACCGCT GGGGGCTGCT TGTCTGCTCA ATACATTTCT
GCCTGGATGA TTGCCCGATT ACGGGGGGCT GCCGAAGCCA GGGAGGTGCT GCACTATTTT
GCCCCGGTAG GTGAAAAAGA CGAGTACGTG GCGCGGGCAC TTTCACATAT CAACGCGAAT
TTACCGGAAC AGCCGGTAGC GCCGGAAACT GCCAGCGCAT CGTGA
 
Protein sequence
MHIAILTFDG FNELDSLIAY GMLSRISLLG DADWKVSISS PTARVTSMNG LTIDAHIGLK 
EANQADAVLI GSGMKTREVA NDPSILGQLQ LNPQRQLIAA QCSGTFLLAK LGLIGQTPAC
TDSSSKPWVQ AAGVKILNQA FFADGNLATA GGCLSAQYIS AWMIARLRGA AEAREVLHYF
APVGEKDEYV ARALSHINAN LPEQPVAPET ASAS