Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4238 |
Symbol | |
ID | 4013079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4465563 |
End bp | 4466207 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637943890 |
Product | DJ-1/PfpI family protein |
Protein accession | YP_551028 |
Protein GI | 91790076 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATAG CCATCCTGAC ATTCGACGGG TTCAACGAGC TGGACTCATT GATTGCCTAT GGAATGCTGA GCCGCATTTC ATTATTGGGT GATGCCGACT GGAAGGTAAG CATTTCCAGT CCGACTGCGC GGGTGACATC GATGAACGGG TTAACCATCG ATGCTCACAT TGGCCTGAAA GAAGCCAACC AGGCCGATGC CGTATTAATA GGCAGCGGCA TGAAAACGCG TGAAGTCGCC AACGACCCGT CCATCCTCGG TCAGCTGCAG CTCAACCCGC AAAGGCAACT CATCGCAGCG CAGTGTTCCG GAACATTTTT GCTCGCAAAG CTGGGCCTCA TCGGCCAAAC CCCGGCGTGC ACAGACTCAA GCAGCAAGCC CTGGGTACAA GCTGCCGGGG TCAAGATTTT GAACCAGGCT TTTTTTGCGG ATGGCAACCT GGCAACCGCT GGGGGCTGCT TGTCTGCTCA ATACATTTCT GCCTGGATGA TTGCCCGATT ACGGGGGGCT GCCGAAGCCA GGGAGGTGCT GCACTATTTT GCCCCGGTAG GTGAAAAAGA CGAGTACGTG GCGCGGGCAC TTTCACATAT CAACGCGAAT TTACCGGAAC AGCCGGTAGC GCCGGAAACT GCCAGCGCAT CGTGA
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Protein sequence | MHIAILTFDG FNELDSLIAY GMLSRISLLG DADWKVSISS PTARVTSMNG LTIDAHIGLK EANQADAVLI GSGMKTREVA NDPSILGQLQ LNPQRQLIAA QCSGTFLLAK LGLIGQTPAC TDSSSKPWVQ AAGVKILNQA FFADGNLATA GGCLSAQYIS AWMIARLRGA AEAREVLHYF APVGEKDEYV ARALSHINAN LPEQPVAPET ASAS
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