| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4146 |
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| Symbol | |
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| ID | 4013201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4359349 |
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| End bp | 4359960 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637943793 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_550936 |
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| Protein GI | 91789984 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.631366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0399426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTAA ACATCTCTCG CCCCGACCCG GGTGCATCCG GCATGGGTGG TCTGGAGCGC
TTTGTGCTGC ACTGGAAGGC CCGGATGCTG CTCATGCTGG GCATGCGCAA GCATGCGATG
GCGGTTTTCA ACGGCATTCT GGCGCGTTCT CCCAACGATG TGGCTGCGCT GAACAGCGTA
GCTTATGACG TACTGCAAAG TGGCCACCGC GTGCTGGCGT TGAGTTATTT CGAGCAGGTG
GCACAGCTGC AACCCAATAG CGCCAATGCC CATTTCAACC AGGCCTTTGT GTGTGAAGAG
CTGGGGCGGC TGGATGACGC CGAGCGCGGG TTTCGTGCCG CCATCGCCAT AGAGGAAAAG
ATGGACCGGG CCTGGTACGG CCTGGGGCTG GTGCTGGTGC GCCTGGGGCG GCTGGAAGAG
GCCGTGGAGG CGCTCCGGCT CAACACCAAA TTGCAGCCCA TGAGCCCGTT TGGCTGGTAC
CAGCTGGCGC GCGTGCATGT GGACTTGAAG CAGCCGGAGA AAGCACGCGC GGTCATTCGG
CACCTGAAAG GGTTCGAGCC CAAGGTGGCG GCCCAGCTGG AGCGTGAGAC CGGGCTGGCG
GTCGGAAATT AA
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| Protein sequence | MSVNISRPDP GASGMGGLER FVLHWKARML LMLGMRKHAM AVFNGILARS PNDVAALNSV
AYDVLQSGHR VLALSYFEQV AQLQPNSANA HFNQAFVCEE LGRLDDAERG FRAAIAIEEK
MDRAWYGLGL VLVRLGRLEE AVEALRLNTK LQPMSPFGWY QLARVHVDLK QPEKARAVIR
HLKGFEPKVA AQLERETGLA VGN
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