| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4137 |
|---|
| Symbol | |
|---|
| ID | 4013192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4344152 |
|---|
| End bp | 4345132 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637943785 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_550928 |
|---|
| Protein GI | 91789976 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.864349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCC GCCAATTACT GCAAACCGCC GCCGCGCTGG CCACCTCCAC CCTGGCCGCG
CTGGGTGTCG CGCAGGCCCA GGTCTCCAGC TTTCCGGTCC GGCCCATCAA GCTGATCGTC
GCCTTCCCGG CAGGCGGGCC GACCGACATC ACCATGCGCT CGCTGGCCGA CAACGCGTCG
AAAATCCTGG GCCAGACGGT GGTGGTGGAA AACAAGCCCG GTGCGGGCGG CACGCTGCCG
GCCCAGCAGC TGCAAACCTC GGCGCCCGAC GGCTACACGC TGGCGCAGAT TCCGCTGGGC
GTGTTCCGGC TCGGCTACAC CACCAAGATC AACTGGGACC CGGTCAAGGA CCTCAGCTAC
ATCATCAATG TGACCGGCTA CGCCTTCGGC ATCGTGGTGC CGGCCGACAG CCCGTTCAAG
ACCTGGGCCG ACTTTGTCGC CTACGCCAAG GCCAATCCCG GCAAGCTGAC CTACGGTTCC
ACCGGCACGC TGACCAGCCC GCACCTGACG ACCGAGCTGA TCGCGCAAAA GGCCGGCATC
GAACTGCAGC ATGTGCCCTA CAAAGGCAGC GCCGACATGA TGCTCGCACT GGTCAGCGGC
CAGCTGATGG CGGGCGCCGA CAGCACCGGC TTTGCGCCGC AGGTCGAGGC CGGCAAGCTG
CGCGTACTCA ACACCTGGGG CGAGAAGCGG CTCGACAAAT TCCCCAATGC GCCCACGCTG
AAAGAGCTGG GCTACGACAT CGTGCAGAAC TCGCCCTTTG GCATTGGCGC ACCCAAGGGC
ACGCCGCCCG AGGTCGTCAA GCGGCTGCAC GATGCCTTCA AAAAAGCCAT GGAAGAACCC
AGCTACGTCG CGGCCCTGGG CCGCTACGAC ATGCTGCCCA ACTACATGAG CTCGGCCGAA
TACACGAAGT TCGCGCAGAA CACGGTCGGC CGGGAGAAGG TCTTGATCGA CAAGCTCGGG
TTGGCCAAGC CTAAAGATTA G
|
|---|
| Protein sequence | MQRRQLLQTA AALATSTLAA LGVAQAQVSS FPVRPIKLIV AFPAGGPTDI TMRSLADNAS
KILGQTVVVE NKPGAGGTLP AQQLQTSAPD GYTLAQIPLG VFRLGYTTKI NWDPVKDLSY
IINVTGYAFG IVVPADSPFK TWADFVAYAK ANPGKLTYGS TGTLTSPHLT TELIAQKAGI
ELQHVPYKGS ADMMLALVSG QLMAGADSTG FAPQVEAGKL RVLNTWGEKR LDKFPNAPTL
KELGYDIVQN SPFGIGAPKG TPPEVVKRLH DAFKKAMEEP SYVAALGRYD MLPNYMSSAE
YTKFAQNTVG REKVLIDKLG LAKPKD
|
|---|
| |