| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4104 |
|---|
| Symbol | |
|---|
| ID | 4013237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4311743 |
|---|
| End bp | 4312165 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637943752 |
|---|
| Product | PilT protein-like |
|---|
| Protein accession | YP_550895 |
|---|
| Protein GI | 91789943 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.393493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGA TCGATTCCTC CGTCTGGATC GACTGGTTGC GCGGCTCGGA CACCGATGCG
GTGCGTTTCG TGCAGGCCAG AGAGGGGCAG GAAGAACTGG CCCTGACCCA GATGATTTAC
CTCGAAGTGC TGCAGGGCGT GTCGTCGGAG CGGCAGTTTG CGGTCACGCA AAAGATCCTG
GGCGCTCAGA CCATGTTGTT GCCGCTGGAC GAGCTGGAAA CTTTCGCGGC CGCCGCGCAG
CTGTACCGGC AAGCCCGCCA GCAGGGTCTG ACGATTCGCA AATCGACCGA CTGTCTGATT
GCCGCGATTG CGCTCGAACA GGGGGCCTTG CTGGTGCATA ACGACCGTGA TTTTTTGGCC
CTGGCGCAGT CAATGCCGCA CCTGCATGTG TACCCGAACC GGCCTGTAGC GCCCGCGCAG
TAA
|
|---|
| Protein sequence | MLLIDSSVWI DWLRGSDTDA VRFVQAREGQ EELALTQMIY LEVLQGVSSE RQFAVTQKIL
GAQTMLLPLD ELETFAAAAQ LYRQARQQGL TIRKSTDCLI AAIALEQGAL LVHNDRDFLA
LAQSMPHLHV YPNRPVAPAQ
|
|---|
| |