Gene Bpro_4064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4064 
Symbol 
ID4013275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4272521 
End bp4273726 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID637943712 
Productextracellular ligand-binding receptor 
Protein accessionYP_550855 
Protein GI91789903 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00184477 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.421947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC AACACAAAAT ACTGAGCGCC GTGACCTGTC TTGGTCTGAT GGCCTCGCTG 
GTGACCGCTC AGGCACAAGA CGTCATCAAG ATTGGCGAGA TCAACAGCTA CAAGGCCCAG
CCGGCCTTTC TGGAGCCCTA CAAGAAAGGC ATGGAGCTGG CTGTCGAGGA AATCAACGCC
TCCGGCGGCG TCAACGGCAA GAAGGTGCAG CTGATCATCC GGGACGACAA CGCCAATCCG
GGTGACGCGG TGCGTGCGGC CGAGGAACTT GTCTCACGTG AGAAGGTGGA TGTGCTGACC
GGCTCCTTCC TGTCCCACAT TGGCCTGGCG CTGACGGACT TTGCCAAACA GAAGAAGTTT
TTCTTCCTGG CCGCGGAACC GCTGACCGAC AAAATTGTCT GGCAAAACGG CAACCGCTAT
ACCTTCCGCC TGCGCACCTC GACTTATATG CAGGTGGCCA TGCTGGTTCC GGAAGCTGCG
GCAATGAAGA AAAAGCGCTG GGCGGTGGTG TACCCCAACT ATGAGTACGG CCAGTCCGCA
GCGGCCACCT TCAAAACGCT GCTGAAGGCG GCCCAGCCCG ATGTGGAGTT CGTCGCCGAG
CAGGCGCCAC CCCTGGGCAA GGTCGATTCC GGCAGCGTGG TGCAGGCCCT CGCTGACGCC
AAACCTGATG CCATCTTCAA CGTGCTGTTT GGTGCCGATC TGTCGAAGTT CGTTCGCGAA
GGCAACACCC GTGGCCTGTT CCAGGGCCGT GAAGTCGTGA GTCTGCTGAC CGGCGAGCCC
GAGTACCTTG ATCCTCTGAA GGACGAAACG CCCAATGGCT GGGTCGTCAC CGGTTACCCC
TGGTACGGCA TCCAGACGCC GGAGCACAAG GCATTCTTTC TGGCTTACCA CGGGAAATAC
AAAGACTATC CCCGCCTGGG CTCCGTCGTT GGGTACAGCG CCATCAAGTC CCTGGCCGAA
GGCATGAAAA AAGCCAGGTC GACCGACACG GAAAAGCTGA TTGCAGCCTT CAGCGGCCTG
CAGGTGAAAA CGCCCTTCGG CCCTGTGGTT TACCGTCCGG AAGATCACCA GTCCACCATG
GGCATCTATG TCGGGCGCAC CAAAAACGAA GGGGGAAAAG GCGTGATGGT CGACTACCGC
TACATGGACG GTGCGAAGTT TCAGCCTGGC AACGCAGAAG TGAAGAAGTT GCGCGCCGCT
GACTAA
 
Protein sequence
MNMQHKILSA VTCLGLMASL VTAQAQDVIK IGEINSYKAQ PAFLEPYKKG MELAVEEINA 
SGGVNGKKVQ LIIRDDNANP GDAVRAAEEL VSREKVDVLT GSFLSHIGLA LTDFAKQKKF
FFLAAEPLTD KIVWQNGNRY TFRLRTSTYM QVAMLVPEAA AMKKKRWAVV YPNYEYGQSA
AATFKTLLKA AQPDVEFVAE QAPPLGKVDS GSVVQALADA KPDAIFNVLF GADLSKFVRE
GNTRGLFQGR EVVSLLTGEP EYLDPLKDET PNGWVVTGYP WYGIQTPEHK AFFLAYHGKY
KDYPRLGSVV GYSAIKSLAE GMKKARSTDT EKLIAAFSGL QVKTPFGPVV YRPEDHQSTM
GIYVGRTKNE GGKGVMVDYR YMDGAKFQPG NAEVKKLRAA D