| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4063 |
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| Symbol | |
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| ID | 4013274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4270470 |
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| End bp | 4272368 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943711 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_550854 |
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| Protein GI | 91789902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.141363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.461236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTT CAGGCTTTAT CGTCCAGCTG CTCAACGGCC TTGCCGGTGC GTCGTCGCTG
TTTCTGGTGG CGGCCGGGCT GTCGCTGATC TTTGGTGTCA CGCGCATCGT CAATTTCGCG
CATGGCTCGT TTTTCATGGT CGGCATTTAT GTCGCCTATT CGCTGGTGGC CACCCTGGGC
AGCACCCTGG GGTTCTGGCC GGCCTTGCTG CTCGCGGCCC TGGCCGTGGG CGTCCTCGGT
GCGCTGGTGG AAGTCTTGCT GCTGCGCCGC ATTTACCATG CACCGGAGCT GTTTCAGCTG
CTCGCCACGT TTGCGCTCGG CCTGGTGATC AAGGACGGGG TGCTCTGGTT CTGGGGTGCG
GAAGAACTGC TGGGCCCCAG GGCGCCCGGT TTGACCGGCT CGGTCTCCAT TCTCGGACGG
CAATTTCCCT CGTACGACCT GTTCCTGATC GTTGCCGGAC CCGTCGTCCT CGGTTTGCTC
TGGTTGCTGC TGACGAAAAC CCGTTGGGGA ACCCTGGTGC GTGCCGCCAC CCAGGACCGG
GAGATGGTGA GTGCGCTCGG GGTCAACCAG GCCTGGCTGT TCACCGCCGT CTTTGCGCTG
GGTGCGCTTC TGGCCGGCCT GGGGGGGGCG CTGCAGCTTC CGCGCGAGCC TGCCAATCTG
GAGATGGACC TGAACATCAT AGGCGCCGCA TTTGTGGTGG TGGTGGTCGG CGGCATGGGC
TCCCTTCCGG GGGCGTATGT GGCGGCACTG CTGATCGCTG AACTCAAGGC CATCTGTATC
TGGCTCGGCC TGGTTGAAAT TGCCGGCATC AGCATTTCCT TTTCCAAGCT CACCCTGGTG
GTGGAATTTC TGGTGATGGC CGCCGTGCTG GTCGCCCGGC CATGGGGCCT GTTCGGCAAA
GCGCAGGCGG CTAGCCACCA TGCCGGCACG GCCGAGGAGC CGCTGCGTCC GCCGGAACGC
CTTTACAAGT ACGGCGGCGC AGCCCTGTTG GCGCTGCTGA TCCTGATGCC TGCGCTCACC
GCGCAGTCGC CCTATGTCAC CGTCCTGCTG ATTGATTTGC TGGTTGCCGT GCTGTTTGCG
GCCAGCCTGC ATTTCATCAT GGGGCCGGCC GGCATGCACT CGTTCGGGCA TGCGGCCTAC
TTTGGCCTGG GTGCCTACGG TGCCGCGCTG CTGGTGCGCA GCCTGAACCT GCCGATGGAG
GTGGCGCTGC TCGTCGCCCC TGCGCTGGCG GCGCTGGGTG CCTTCGTCTA CGGCTGGTTC
TGCGTCCGGC TGTCCGGCGT TTACCTGGCG ATGCTGACCC TGGCATTTGC GCAAATTACC
TGGGCGATCT GCTACCAATG GGATGCGTTC ACCGGCGGCA GCAACGGGCT GACCGGCGTG
TGGCCGGCCG GCTGGCTGGC GGACAAACGG ATCTACTACT ACCTGACCCT GGTGCTGGTG
GTGGGCGGAG TACTTTTGAT GCACAGGATG TTGTATTCAC CCTTTGGCTA CGCAATGCGC
GCCGCGCGCG ACTCCGTACT TCGGTCTGAC GCGATTGGTA TCAACGTCAA GCGCATGCAA
TGGGTGGCTT TTGTCATGGC GGGCTCTTTC GCGGGCCTGG CCGGCGCGCT CTACGCATTT
TCAAAAGGCA GCATCTCCCC GGAAAGCCTG CACGTGGGCA AATCCATCGA CGGTCTGGTG
ATGGTCCTGC TGGGCGGTGT GCAGACGCTG CTGGGCCCGG TGGTCGGCGC AGTCACCTTC
ACCTGGCTGC ACGACACGGT GGCACGGAAC ACCGATTACT GGCGCGCCAT GCTGGGGGCC
ATCATCCTGA TGCTGGTGCT GCTGTTTCCC CAGGGTATCG CAGGCTTTGT CAAACAGCTG
GTGTCGAATC GGCGCGATGC AAAAAAGGTG CAATCATGA
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| Protein sequence | MSFSGFIVQL LNGLAGASSL FLVAAGLSLI FGVTRIVNFA HGSFFMVGIY VAYSLVATLG
STLGFWPALL LAALAVGVLG ALVEVLLLRR IYHAPELFQL LATFALGLVI KDGVLWFWGA
EELLGPRAPG LTGSVSILGR QFPSYDLFLI VAGPVVLGLL WLLLTKTRWG TLVRAATQDR
EMVSALGVNQ AWLFTAVFAL GALLAGLGGA LQLPREPANL EMDLNIIGAA FVVVVVGGMG
SLPGAYVAAL LIAELKAICI WLGLVEIAGI SISFSKLTLV VEFLVMAAVL VARPWGLFGK
AQAASHHAGT AEEPLRPPER LYKYGGAALL ALLILMPALT AQSPYVTVLL IDLLVAVLFA
ASLHFIMGPA GMHSFGHAAY FGLGAYGAAL LVRSLNLPME VALLVAPALA ALGAFVYGWF
CVRLSGVYLA MLTLAFAQIT WAICYQWDAF TGGSNGLTGV WPAGWLADKR IYYYLTLVLV
VGGVLLMHRM LYSPFGYAMR AARDSVLRSD AIGINVKRMQ WVAFVMAGSF AGLAGALYAF
SKGSISPESL HVGKSIDGLV MVLLGGVQTL LGPVVGAVTF TWLHDTVARN TDYWRAMLGA
IILMLVLLFP QGIAGFVKQL VSNRRDAKKV QS
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