Gene Bpro_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3993 
Symbol 
ID4013321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4188050 
End bp4189054 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID637943642 
Productglycosyl transferase family protein 
Protein accessionYP_550785 
Protein GI91789833 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.44972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.974953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATGC GTCTTTCAAT TTGTATTCCA ACCTACAACT TCGGAGGCTT TATTGGCGAG 
ACGCTGGATA GCTTGCTGCC GCAGGTTTCC GATGAGGTGG AGGTTGTTGT CCTGGATGGT
GGTTCCACGG ACGACACGGG CGACGTTGTA GCTGTCAGAA TGCAGCATCA CAAGCAGTTG
ACATATTACC ATCAAGATTT TCGGGGTGGA ATTGATGCGG ATATTGAAAA GGTGATCAGT
CTTGCCCACG GTCAATATTG TTGGCTATTT TCAGCAGACG ATATTATGAT GCCCGGTGCA
GTAAAGAAAG TACTCCAGGC GATAAGATCG CATCATGAAA TATATGTTTG CGAGCATGTG
TTGTGCAGTT TTCAGATGAA GCCGATTTGC GAGTACCCAC CATTAAATAA TACGTGTGGC
CCGGCAACAT TTGATCTTGC AGATAGTCAG CAAAAAAGAA AATATTTTAG AATGGCCAGA
ACCAGTGAGG CGTTTTTTAG TTTTTTATCA ATCCCTATTT TTAGAAAAGA TGTATGGGAT
CGTGTGAAAA TACCCGCCTC TTTTTATGGG ACGTGCTGGG TGGTTGCTGG GCGACTGCTG
GCTTCCGTCC CTGACGGGAT AAAAGTTAGT TATTTGTCTG AAAAGCTGCT TTTTAAGCGC
GGCGGAAACG ATTCCTTTTT GGATCGCGGA ATTGTTAATC GCTGTAGAAT TGGGATTGAA
GCTTTCCAAC ATATTGGTAA TACCATATTT GGTGTCGACT CGGAAGAGGC GTTTCACATC
AGGCGGGTGT TGCGATTTGA TATTCCGTTG AAAATTTTGC TTGTTGCCAA GTTGAGAGCT
GCGCAAAATC CTGAGGTGGA AGATAGAGCT GTTCTGGATA GGATTGTTGC GCTGCATTAC
TCTGATCCAG GCTGGCGTAA CTTCTTTAAC CGCAATGCAT ACAAAATTGC CCCGGTTCAG
GTTTTGGCCG CCGGATCCTG GCTTAAAAGG CAGTTCGCGA GGTGA
 
Protein sequence
MVMRLSICIP TYNFGGFIGE TLDSLLPQVS DEVEVVVLDG GSTDDTGDVV AVRMQHHKQL 
TYYHQDFRGG IDADIEKVIS LAHGQYCWLF SADDIMMPGA VKKVLQAIRS HHEIYVCEHV
LCSFQMKPIC EYPPLNNTCG PATFDLADSQ QKRKYFRMAR TSEAFFSFLS IPIFRKDVWD
RVKIPASFYG TCWVVAGRLL ASVPDGIKVS YLSEKLLFKR GGNDSFLDRG IVNRCRIGIE
AFQHIGNTIF GVDSEEAFHI RRVLRFDIPL KILLVAKLRA AQNPEVEDRA VLDRIVALHY
SDPGWRNFFN RNAYKIAPVQ VLAAGSWLKR QFAR