Gene Bpro_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3987 
Symbol 
ID4013354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4180467 
End bp4181597 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content63% 
IMG OID637943636 
Productglycosyl transferase, group 1 
Protein accessionYP_550779 
Protein GI91789827 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACA CACTGATGTT CGTGGTGAAT GTGGATTGGT TTTTCCTGTC TCATCGCTTG 
CCGATCGCCC TGGAGGCTCA GCGGCAGGGT TATCAGGTGC ACATTGCCAC AGGTTTGACC
GACAGGCTTG ATGAACTCCA GCGCCATGGA CTCGTGGTAC ACCCCCTGGC GCTGGACCGC
AGTAGCGTTG GTTTGGGCAA TGCGTGGCGT ACGGTGGCTC AGCTGTGGAG GGTCTTCAGG
GCCGTGCGGC CCGACGTGGT GCATTTGGTC ACCATCAAGC CCGTACTCCT GGGCGGCCTG
GTGGCGCGGC TGGCAGGGGT GCCTGCAGTC GTGGCGGCAG TGTCGGGTCT GGGTTTTGTA
TTCATGGCGC ACGGCGCCAA GGCAAAGGTG CGTCGCTGGC TGGTGGGCGC ACTGTACCGC
GTGGCTTTGG GCCATCGCAA CCTGAAGGTG ATTTTCCAGA ACCCTGACGA TCTGCGCAGC
CTGGCCAAGG TAGCGGATTT GCCTGATAGC CGGGTAACCA TGATTCGTGG CTCGGGAGTG
GATCTGGAGC GCTATATCCC CCAGCCGTTG CCGGGGGGCG TGCCGGTGGT GGTGCTGGCG
GCGCGTTTGC TGGCCGACAA GGGTGTACTC GAATTTGTGC AGGCGGCGCG TTTGCTCAAG
CAGCGGGGCT GCCACGCGCG GTTTGCCCTG GTGGGCACGG TTGATCCGGC CAACCCGACC
AGCTTTACAC AAGCCGAGGT GGATGCCTGG GTTACCGAGG GCGTGGTGGA GTGGTGGGGG
CATCGCTCAG ACATGCCTCA GGTGCTGGTG GCTGCGCAGT TGGTAGTGCT GCCTTCCTAC
CGCGAGGGTT TGCCCAAGGT GCTGCTGGAG GCGGCGGCTT GCGGGCGGGC TGTGGTTACG
ACCGATGTGC CCGGTTGCCG CGACGCCATC GACCCTGGTG TCACTGGTGT ATTGGTTCCC
GTGTGCAACG CTGCGGCGCT GGCCGATGCG ATGGAGGTCT TGATCAACAG CCCTGCGCGG
TGCCAGGCCA TGGGCGACGC AGGACGTGCG CTGGCCGAAA GCGCTTTCGA TGAGCGACAG
GTGGTGGCTG CGCATTTGCG CATCTACCAG GAACTGGTCG ACAAATCATG A
 
Protein sequence
MTHTLMFVVN VDWFFLSHRL PIALEAQRQG YQVHIATGLT DRLDELQRHG LVVHPLALDR 
SSVGLGNAWR TVAQLWRVFR AVRPDVVHLV TIKPVLLGGL VARLAGVPAV VAAVSGLGFV
FMAHGAKAKV RRWLVGALYR VALGHRNLKV IFQNPDDLRS LAKVADLPDS RVTMIRGSGV
DLERYIPQPL PGGVPVVVLA ARLLADKGVL EFVQAARLLK QRGCHARFAL VGTVDPANPT
SFTQAEVDAW VTEGVVEWWG HRSDMPQVLV AAQLVVLPSY REGLPKVLLE AAACGRAVVT
TDVPGCRDAI DPGVTGVLVP VCNAAALADA MEVLINSPAR CQAMGDAGRA LAESAFDERQ
VVAAHLRIYQ ELVDKS