| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3960 |
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| Symbol | |
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| ID | 4013366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4152665 |
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| End bp | 4153411 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943609 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_550752 |
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| Protein GI | 91789800 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC TTGACCTGGC CGGCCGCCAT GCGGTGATCA CCGGCGGCGC GGCGGGCCTG
GGCTTTGCCA TTGCGCAGCG CATGCTGGCT TCGGGCGCCA CGGTCAGCCT GTGGGACCTC
AACCCGCAGG CGCTGGCGGC GGCCCGAGGC GAACTCGGCG CGGGCGTGCA TACCGTTGTG
GTGGATGTGG GCAGCCATGC GAGCGTGGTG CAGGCCGTGC GGCAAACCGT GGCCCACCAC
CCGATCATTG ATGTGCTGGT CAACTCGGCC GGCATCACCG GCCCGAACGT GAAGCTGTGG
GACTACCCGC CCGAGCAATG GATGCAAGTG CAGCAGGTCA ACCTGAATGG GCTTTTCTTT
TGCTGCCGCG AGGTGGTGCC GCACATGCGC ACGCGCAACT ATGGCCGCAT CATCAACATC
GCCTCGGTGG CGGGCAAGGA CGGTAATCCC AATGCCAGCG CTTACAGTGC CAGCAAGGCG
GCGGTGATTG CGCTCACCAA ATCGCTGGGC AAGGAACTCG CCGATACTGG CGTGCGCGTC
AATTGCGTGA CACCGGCTGC GGTAAAGACG CCAATTTTTG ACCAGATGAC ACCGGAACAC
ATCCAGTTCA TGCTGTCGAA AATCCCGATG GGCCGCTTCG GCACGCCCGA CGAAGTCGCG
GCCATGGTGA CGTGGCTGGC CACCGAAGAG TGTTCGTTTT CGACCGGCGC CGTGTTCGAC
CTGTCGGGCG GGCGTTCGAC TTACTGA
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| Protein sequence | MNQLDLAGRH AVITGGAAGL GFAIAQRMLA SGATVSLWDL NPQALAAARG ELGAGVHTVV
VDVGSHASVV QAVRQTVAHH PIIDVLVNSA GITGPNVKLW DYPPEQWMQV QQVNLNGLFF
CCREVVPHMR TRNYGRIINI ASVAGKDGNP NASAYSASKA AVIALTKSLG KELADTGVRV
NCVTPAAVKT PIFDQMTPEH IQFMLSKIPM GRFGTPDEVA AMVTWLATEE CSFSTGAVFD
LSGGRSTY
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