| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3902 |
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| Symbol | |
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| ID | 4013426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4096764 |
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| End bp | 4097432 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637943553 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_550696 |
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| Protein GI | 91789744 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000658211 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0529848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGGAC TCGACCTGAG TTTCCTGAAC TGGGACATCA TTTCCAGGTT CGTCAAGAAC
GGTTTCATCT TCAGCATCCA GCTGACGGCG ATCGCCACCC TGGGCGGCAT TATTTTCGGC
ACCATTTTGG CGCTGATGCG TCTGTCCGGC CGCAAATTCC TGATGCTTCC GGCCACCTTT
TACGTCAACG GCATGCGCTC CGTACCGCTG GTGATGGTGA TCCTGTGGTT TTACCTGCTG
GTGCCCACGC TGATAGGGCG GCCGATCGGG GCCGAGCTCT CGGCCATCAT CACCTTCGTT
GCGTTTGAAG CGGCTTATTT CAGCGAGATC ATGCGGGCCG GCATCCAGTC CATTTCGCGC
GGCCAGGTCC ACGCCGGCCA GGCGCTGGGC ATGACCTACG GCCAGAACAT GCGCCTGGTG
GTGCTGCCGC AGGCCTTTCG CAACATGGTG CCGATTTTGC TGACGCAGAC CATCATCTTG
TTTCAGGACA CCTCGCTGGT TTACGCCATC GGTGCCTATG ATTTGCTCAA AGGCCTGACA
ACCGCCGGCA AGATTTACGG CAGGCCCGAA GAGGCCTACC TGCTGGCCGC CGTGGTTTAT
TTCGTGATGT GTTTTGGCTT GTCGTATGTC GTCAAGCAGC TGCAAAACAA GATTGCCATT
GTTCGATAG
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| Protein sequence | MLGLDLSFLN WDIISRFVKN GFIFSIQLTA IATLGGIIFG TILALMRLSG RKFLMLPATF
YVNGMRSVPL VMVILWFYLL VPTLIGRPIG AELSAIITFV AFEAAYFSEI MRAGIQSISR
GQVHAGQALG MTYGQNMRLV VLPQAFRNMV PILLTQTIIL FQDTSLVYAI GAYDLLKGLT
TAGKIYGRPE EAYLLAAVVY FVMCFGLSYV VKQLQNKIAI VR
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