| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3735 |
|---|
| Symbol | |
|---|
| ID | 4013609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3940568 |
|---|
| End bp | 3941149 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637943389 |
|---|
| Product | Phage-related baseplate assembly protein V |
|---|
| Protein accession | YP_550532 |
|---|
| Protein GI | 91789580 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4384] Mu-like prophage protein gp45 |
|---|
| TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC TGCAACGCAT GATGGCCCCG ATGCAGCGCC GCGTAATGCT GATGGTGGGC
CGTGCCGTGC TGGAGCTGGT CAACGACAAC ACCAAGGTGC AGGCCGCGCA GGTCAGCCTG
CTGGAGGGCG AAGTGCGCGA CCAGGTCGAG CGCTTTCAGA ACTACGGCTT TACCAGCGTG
CCAGAGGCCG GTGCCGAGGG CGTGGCGCTG TCGGTGCAGG GCAACCGCGA CCACATCATT
CTGGTGGCGG TGGACGACCG CCGCTATCGC AAGCTGGGCT TGCTGCCCGG AGAGGTGGCT
GTTTACACCA AGTGGGGTGA CTACATCCAT ATCAAACAGG GCGAGATCGA GATCAAGCAT
GCCACCAAGG TTGTGATCAC GAGCCCGTTG GTCACCATGA GTGGCAACCT GCAGGTGGCG
GGCAATATCA CCGCCGGTGG CTCTTTGAAC GTCACGGGCT CTGCGGCCGT TGCCGGGTCG
ATCACGGCTA CCGGCGACGT GGTGGGTGCC GGCATATCGC TGAGCACGCA CAGGCAAAGT
GGCGTTACGC CTGGCGGTGG TCTGTCGGGG GTGCCGGTAT GA
|
|---|
| Protein sequence | MNALQRMMAP MQRRVMLMVG RAVLELVNDN TKVQAAQVSL LEGEVRDQVE RFQNYGFTSV
PEAGAEGVAL SVQGNRDHII LVAVDDRRYR KLGLLPGEVA VYTKWGDYIH IKQGEIEIKH
ATKVVITSPL VTMSGNLQVA GNITAGGSLN VTGSAAVAGS ITATGDVVGA GISLSTHRQS
GVTPGGGLSG VPV
|
|---|
| |