| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3642 |
|---|
| Symbol | |
|---|
| ID | 4013671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3843820 |
|---|
| End bp | 3844419 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637943300 |
|---|
| Product | anti sigma-E protein RseA |
|---|
| Protein accession | YP_550444 |
|---|
| Protein GI | 91789492 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.191814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCC TGGCCGATGG CCAGCTGGGT GGTGAGGACT TTGCCGCCGC ACTTCAGGCC
TGCCAGCACG ACGAATCTGC GTTTGCCAGC TGGGCCGCCT ACCATGTGAT CGGCGAGGTG
TTGCGGTCCC CTGAGCCCGT GGTGCACGGG GCGGACCTGG CCTTTCTGGG GCGGCTGAAC
CAGCGCCTTT CGCAAGAGCC ACAAGAGCCG TTGCTTCGGG CGCGCCACCA GCCTGTTCCC
CCTGATTCAG CGGCGCAAGC CAGGGGAAAA ACTGGTGCGA ACGTGGTCCA CCACCGCGGC
GCGGCATCCA ATGACAGCAT GCTGCCCTGG AAGTGGGTGG CCGGCGTTGC TTCCCTGGCA
GCCATTTCCG CCATCGCGTG GAACGCCTCG GGCCTGCTGA TGCCTGATGC ACCGCAGCTT
GCCCAAGGCC CGGCTCAGCA GGTGCTGGTG GCTTCACCGC AGGGTCCGAT AGTGCGCGAT
GCCCGGCTGG AGGAGCTGCT GGCCGCACAC AAGCAGTTGG GTGGTGCATC CGCCTTGCAG
GTGCCGTCGG GGTTTTTGCG AAACGCCACC TTTGAAACGC CTCAGAATGC AGGGCGTTGA
|
|---|
| Protein sequence | MSALADGQLG GEDFAAALQA CQHDESAFAS WAAYHVIGEV LRSPEPVVHG ADLAFLGRLN
QRLSQEPQEP LLRARHQPVP PDSAAQARGK TGANVVHHRG AASNDSMLPW KWVAGVASLA
AISAIAWNAS GLLMPDAPQL AQGPAQQVLV ASPQGPIVRD ARLEELLAAH KQLGGASALQ
VPSGFLRNAT FETPQNAGR
|
|---|
| |