| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3546 |
|---|
| Symbol | |
|---|
| ID | 4013770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3746520 |
|---|
| End bp | 3747077 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637943208 |
|---|
| Product | phenylacetic acid degradation-related protein |
|---|
| Protein accession | YP_550352 |
|---|
| Protein GI | 91789400 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.572373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.256771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA AGACCCCACA AGACACGTTG ACACAATGGC AGGAACAAAG CGCAGCCGTG
CGCGCCCGCA TGCTGGCGGG CGGTGGCAAG CCAGGCCTTG CCGGCCCCGA ACAGGTGGCG
GGCAAGACCG GCATGGAGGT GATGCAGGCC ATGCTGGCCG GTGAGTTTCC CTACCCCCAC
ATTGCGGAAA CGCTGGACTT CGCGCTGATT GAGGTGGAGC CCGGAAAAGC CATCTTCCAG
GGAACGCCGC AGCTCAAGCA CTACAACCCG CTGGGTACGG TGCATGGCGG CTGGTACGCC
ACGCTGCTCG ATTCAGCCGT AGGCTGCGCC GTGCACACCA TGATGCCCGC AGGGCGGGCC
TACACGACGG CCGAGTTGAG CCTCAACATT GTGCGGGCAG CGTCGCACCA ATCCGGGCCG
CTGCGTGCCA TCGGCACCGT CATCCACTGC GGCAGGCAAC TCGCCACGGC CGAGGGCCGC
ATCGTCGGGC CGGACGGCAA GCTGTATGCG CATGCCACGA CAACCTGCCT GGTCTTTGAG
CTGCCGAAGT TGGGGTAA
|
|---|
| Protein sequence | MNTKTPQDTL TQWQEQSAAV RARMLAGGGK PGLAGPEQVA GKTGMEVMQA MLAGEFPYPH
IAETLDFALI EVEPGKAIFQ GTPQLKHYNP LGTVHGGWYA TLLDSAVGCA VHTMMPAGRA
YTTAELSLNI VRAASHQSGP LRAIGTVIHC GRQLATAEGR IVGPDGKLYA HATTTCLVFE
LPKLG
|
|---|
| |