| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3475 |
|---|
| Symbol | |
|---|
| ID | 4013855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3678301 |
|---|
| End bp | 3679041 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637943138 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_550282 |
|---|
| Protein GI | 91789330 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGCAA ACACCTTGGT GGAAATCAAC CAGCTGCGCA AAAGCTTTGG CAGCCATGAG
GTGTTGAAAG GCATTGACCT TGAAGTCAAG GCTGGCGAGG TGATTGCCAT CATCGGCAAG
AGCGGCTCGG GCAAGAGCAC GCTGCTGCGC TGCATCAACG GGCTGGAGGA GTTCCAGAGC
GGCACGCTGC GCGTGGACGG CAAGCACCTG CTGCACGACA ACCCGCATGT GATGCGCGAC
CTGCGCCAGC GCGTCGGCAT GATCTTCCAG AGCTTCAACC TGTTCCCGCA TCTCACCGTC
GGCAAAAACA TCATGCTGGC CCCGACGCTG GTCAAGAAGA CGGCCGGTGC ACCGGCGCAG
GAGCAGGCCC GTGCGCTGCT GCAGCGGGTC GGTCTCGCCG AAAAATTCGA TGCCTGGCCC
GACCAGCTCT CGGGTGGCCA GCAGCAGCGC GTGGCGATCG CCCGCGCGCT GGCGATGCAA
CCCTCAGTGC TGCTGTGTGA CGAAATCACG TCCGCGCTCG ACCCGGAACT GGTGGGAGAG
GTGCTGCAGG TGGTGGAAAG CCTGGCGGCC GAGGGCATGA CGCTGCTAAT GGTCACGCAT
GAAATGAACT TTGCCCGCAA GGTCGCCGAC CGGCTGGTCT TCATGCACCA GGGCCGGGTG
CATGAAATCG GCCCGCCGGA CGAGGTCTTT TCAAACCCGC AAACGCCTGA GCTGAAGCAG
TTTCTCGGGA TGATCCAATA G
|
|---|
| Protein sequence | MGANTLVEIN QLRKSFGSHE VLKGIDLEVK AGEVIAIIGK SGSGKSTLLR CINGLEEFQS
GTLRVDGKHL LHDNPHVMRD LRQRVGMIFQ SFNLFPHLTV GKNIMLAPTL VKKTAGAPAQ
EQARALLQRV GLAEKFDAWP DQLSGGQQQR VAIARALAMQ PSVLLCDEIT SALDPELVGE
VLQVVESLAA EGMTLLMVTH EMNFARKVAD RLVFMHQGRV HEIGPPDEVF SNPQTPELKQ
FLGMIQ
|
|---|
| |