| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3375 |
|---|
| Symbol | |
|---|
| ID | 4013950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3568250 |
|---|
| End bp | 3568966 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637943039 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_550183 |
|---|
| Protein GI | 91789231 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0302921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.286195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA CCTACGGTCA GTTCTGCACC GTTGCAAGGG GTGCCGAGGT GTTGTGCGAG
CGATGGACGC CGCTGGTTGT GCGCGAGTTG CTGTGCGGCA GCAAGCGCTT CAACGACCTG
CATCGCGGCG TACCGCGAAT GTCCACCAGC CTGCTGACGC AGCGGCTTCA TCGTCTCGAG
GAGTTCGGTG TCGTGCGCCG CGACGCCGTC GGCAAGGTTT GGGAATACAG CCTCACAGAG
GCTGGCGAGG AACTTCGACC CATTGTCATG GCGCTTGGCC ATTGGGGTGC GCAGTGGATT
GGCAGCCGCC TGCGCGACGA TGAACTGGAT GCGGGCTTGC TCATGTGGGA TATGCGCCGA
TTCGCGTGCA TCCAGGAGTT CCCGTCCAGG CCCGTGGTCA TCCACTTCCA GTTCCGCGAC
GCACGGGCTC GCGAGCGCGC TTGGTGGCTC GTAGTGGAGG AAGGCGTGGC CGACCTGTGT
CGCGACGACC CAGGGCGCGA GCTGACGCTC GTTGTGGATG CTTCCGTGCG CGCTTTGACC
GAAGTGTGGG CGGGTGACCG CACGCCTCAG CAGGCCCTTC AGTCGCGCGA GATCCGTGTT
GATGGGGCGA AGCGCGACGC GGAAGACCTA TGGCGGTGGC TGGGCACGAG TGCGTTCGCC
TCGACGCGAC GCGCCGCGGG ACGGATGTCC CCGAGCGGCC AATCTCTGAC GGCATAG
|
|---|
| Protein sequence | MENTYGQFCT VARGAEVLCE RWTPLVVREL LCGSKRFNDL HRGVPRMSTS LLTQRLHRLE
EFGVVRRDAV GKVWEYSLTE AGEELRPIVM ALGHWGAQWI GSRLRDDELD AGLLMWDMRR
FACIQEFPSR PVVIHFQFRD ARARERAWWL VVEEGVADLC RDDPGRELTL VVDASVRALT
EVWAGDRTPQ QALQSREIRV DGAKRDAEDL WRWLGTSAFA STRRAAGRMS PSGQSLTA
|
|---|
| |