Gene Bpro_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3322 
Symbol 
ID4014014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3516731 
End bp3518002 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content59% 
IMG OID637942986 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_550130 
Protein GI91789178 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.204494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTC ATACCCGCAG ACATACCTTG AAAGCTATCG GCGCAGGTGC GCTTGCCGGA 
TTCGGCATTG CACCAGCCTT TGCCCAGAAC CGCCCCCTGA AGATCGGCGT GATTGCGCCG
CGGGGCGGCG TTGCGGGCAC GGTTGGTGAA TGCGGGCTCC GAGGACTGCA ATGGACTGCC
GAGAAGCTCA ACGCCGGCAA CGGAATCGGC GGGCGCAAGA TCGAGTTGGT CATTGAAGAG
GAGACGAGCC CTAAAGACTC GATCGAACGC TTCCGCAAAC TGGTGCTGCA GGACAAGGTG
GATTGTGTTC AGGGCGTCGT ATCCACCGGT GTCAGCCTGG CCCTGGCCCC GGCAGCTGAA
GACAGCCGCA TGATCACTAT CTTCTGGGAC GGAACTACCC AGGACGGTGT CAAGGAAACC
ATGCCCAATC CGCGCTACGT GTTCCGCAGC AACGACAACG AGTGCGAGGC TGTGATGGCA
TCGCTTCTGG CCATCAAATA TTTCAAGGGG CAGTTCAAGA CGATCGCGGG TATCAACCCC
GATTACTCGT ACGGCCGTAA CAACTGGGCC GCATTTCAGG CGCTCCTCAA GAAGTTCGGC
ATTGAACACA CCGTCGTGTC CGAGCAATGG TCCAAGGTTG GAAATCTTGA TCTGACCTCC
AACGTTGCGG TCCTGAAAGC GGCCAAGCCG GACCTGATTT TCTCATCCTT GCTGTTTGCT
GATCTGCCCG TCTTCATGAA GCAGGCACAT GCCGCCGGGC TGACGTCGAA CACCAAATTC
GTCCTGCCCG CCGCCGGATG GCAGCACACC GGTCTCAAAA AGGACTCCAT GCCCGAGGGT
GTGATTTTCG GGCACAACAC GCTCTATTTC GATCACCCGC AGGCGAGCCC CGTTCAGCGC
GAATTCGTTG ACTGGTACGT GAACAGATTC AAGGACTATC CTCACTGGGA GGCCGACCGC
GCGTATTTCT CGCTCATGGT CTACAAAGCG GGCGTCGAGA AGGCACTCGC CGCCAAGTCG
GGGAGCTGGC CCTCAATGAC GGATATTGCC GCGTCCATGG CTGGCGTCGA AGTGCAATCG
CTAGGCGGAC GCGGGGGCAT GCGAAGCGAC CACATCGCCA ACCAGACATA CCACCAGGGC
CTGTCCACCA ACAACAACCG CTATGACTTC ACCACGCTCG CCCGGGTGGA CAGCATGTAC
TCCGACCAGA TCCAGAAGCC CGCAGGCGCG GACTTCTGGG AGTGGCTGAA GACTTCGAGC
TTCAAGGTTT AG
 
Protein sequence
MHTHTRRHTL KAIGAGALAG FGIAPAFAQN RPLKIGVIAP RGGVAGTVGE CGLRGLQWTA 
EKLNAGNGIG GRKIELVIEE ETSPKDSIER FRKLVLQDKV DCVQGVVSTG VSLALAPAAE
DSRMITIFWD GTTQDGVKET MPNPRYVFRS NDNECEAVMA SLLAIKYFKG QFKTIAGINP
DYSYGRNNWA AFQALLKKFG IEHTVVSEQW SKVGNLDLTS NVAVLKAAKP DLIFSSLLFA
DLPVFMKQAH AAGLTSNTKF VLPAAGWQHT GLKKDSMPEG VIFGHNTLYF DHPQASPVQR
EFVDWYVNRF KDYPHWEADR AYFSLMVYKA GVEKALAAKS GSWPSMTDIA ASMAGVEVQS
LGGRGGMRSD HIANQTYHQG LSTNNNRYDF TTLARVDSMY SDQIQKPAGA DFWEWLKTSS
FKV