Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3322 |
Symbol | |
ID | 4014014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3516731 |
End bp | 3518002 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637942986 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_550130 |
Protein GI | 91789178 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.204494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACTC ATACCCGCAG ACATACCTTG AAAGCTATCG GCGCAGGTGC GCTTGCCGGA TTCGGCATTG CACCAGCCTT TGCCCAGAAC CGCCCCCTGA AGATCGGCGT GATTGCGCCG CGGGGCGGCG TTGCGGGCAC GGTTGGTGAA TGCGGGCTCC GAGGACTGCA ATGGACTGCC GAGAAGCTCA ACGCCGGCAA CGGAATCGGC GGGCGCAAGA TCGAGTTGGT CATTGAAGAG GAGACGAGCC CTAAAGACTC GATCGAACGC TTCCGCAAAC TGGTGCTGCA GGACAAGGTG GATTGTGTTC AGGGCGTCGT ATCCACCGGT GTCAGCCTGG CCCTGGCCCC GGCAGCTGAA GACAGCCGCA TGATCACTAT CTTCTGGGAC GGAACTACCC AGGACGGTGT CAAGGAAACC ATGCCCAATC CGCGCTACGT GTTCCGCAGC AACGACAACG AGTGCGAGGC TGTGATGGCA TCGCTTCTGG CCATCAAATA TTTCAAGGGG CAGTTCAAGA CGATCGCGGG TATCAACCCC GATTACTCGT ACGGCCGTAA CAACTGGGCC GCATTTCAGG CGCTCCTCAA GAAGTTCGGC ATTGAACACA CCGTCGTGTC CGAGCAATGG TCCAAGGTTG GAAATCTTGA TCTGACCTCC AACGTTGCGG TCCTGAAAGC GGCCAAGCCG GACCTGATTT TCTCATCCTT GCTGTTTGCT GATCTGCCCG TCTTCATGAA GCAGGCACAT GCCGCCGGGC TGACGTCGAA CACCAAATTC GTCCTGCCCG CCGCCGGATG GCAGCACACC GGTCTCAAAA AGGACTCCAT GCCCGAGGGT GTGATTTTCG GGCACAACAC GCTCTATTTC GATCACCCGC AGGCGAGCCC CGTTCAGCGC GAATTCGTTG ACTGGTACGT GAACAGATTC AAGGACTATC CTCACTGGGA GGCCGACCGC GCGTATTTCT CGCTCATGGT CTACAAAGCG GGCGTCGAGA AGGCACTCGC CGCCAAGTCG GGGAGCTGGC CCTCAATGAC GGATATTGCC GCGTCCATGG CTGGCGTCGA AGTGCAATCG CTAGGCGGAC GCGGGGGCAT GCGAAGCGAC CACATCGCCA ACCAGACATA CCACCAGGGC CTGTCCACCA ACAACAACCG CTATGACTTC ACCACGCTCG CCCGGGTGGA CAGCATGTAC TCCGACCAGA TCCAGAAGCC CGCAGGCGCG GACTTCTGGG AGTGGCTGAA GACTTCGAGC TTCAAGGTTT AG
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Protein sequence | MHTHTRRHTL KAIGAGALAG FGIAPAFAQN RPLKIGVIAP RGGVAGTVGE CGLRGLQWTA EKLNAGNGIG GRKIELVIEE ETSPKDSIER FRKLVLQDKV DCVQGVVSTG VSLALAPAAE DSRMITIFWD GTTQDGVKET MPNPRYVFRS NDNECEAVMA SLLAIKYFKG QFKTIAGINP DYSYGRNNWA AFQALLKKFG IEHTVVSEQW SKVGNLDLTS NVAVLKAAKP DLIFSSLLFA DLPVFMKQAH AAGLTSNTKF VLPAAGWQHT GLKKDSMPEG VIFGHNTLYF DHPQASPVQR EFVDWYVNRF KDYPHWEADR AYFSLMVYKA GVEKALAAKS GSWPSMTDIA ASMAGVEVQS LGGRGGMRSD HIANQTYHQG LSTNNNRYDF TTLARVDSMY SDQIQKPAGA DFWEWLKTSS FKV
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